Gene Information

Name : PsycPRwf_0275 (PsycPRwf_0275)
Accession : YP_001279180.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 327789 - 329057 bp
Length : 1269 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like

DNA sequence :
ATGAGCAACTCTGACAGCACTGAAACTGCCTCACATTTACACCCCTCATCTGCGCACGCTGCTGCTATTGGCTTATCCAA
GATTGTGGTCATAGGTGCAGGCTATGTGGGCCTATCCAACGCTATTTTATTGGCGCAGGCTCATTTACATACCCAAGTAA
TGCTGTTTGATATCGACCAAAACAAAATACAGTTATTACAACAAAATCAGTCACCGCTACAAGACACCGAGATTTGTGAT
TATCTGGCGCATAAGCCGCTCAACCTAACTGCCACGATGCAGGCGGTGATAGAGGATCAGGGCATTTATCAAGCCAGCGA
TTTGGTGATCATTGCCACCCCGACGAACTACGATGTGGCCTCAGGTAAGTTTGATACCTCCTCGGTTGAAGCCAGTATTG
CCGCAGTTCGACAGCAAAATGCGACGGTACCCATCGTGATTAAATCGACCATTCCGATTGGCTTTACCGACAACATGCGT
CAGCAGTTTGATAATCAAATTTTGTTTATGCCGGAGTTTTTGCGCGAGGGCCAAGCGCTGTATGACAATTTATATCCGTC
TCGTATTATTGTGGGCGCAAGCTTAGAGCAGCAAGATTTGGCATCGGCCTTAATGCACTTATATCAACAAGCCAGCCTAG
CGCCTGAGGTGGCGACGCTGATGATGCCGCCGACGGAAGCTGAAGCCGTCAAGCTATTTGCCAACAGTTATCTGGCCACC
CGCATTGCGTTTTTTAATGAATTAGACAGCTTTGCTGAAAAGCATCAATTAAACAGCCAGTCCATCATCACCGGCGTCGG
CTTAGACCCGCGTATTGGCCAGCATTATAACAACCCCTCTTTTGGCTATGGCGGCTACTGCCTACCCAAAGATACCCAGC
AGTTAAAGGCCAATTATGCCGGTATTCCTGCCAACTTAATCCATGCTGTGGTCGATGCCAACAACACCCGAAAACGTTTC
ATCGCCCGTCAAATCATCGACAAAAACCCCAATCAAGTGGGCATTTATCGCCTAAGCATGAAAAAAGACGCTGATAACTT
TAGAGACTCGGCGGTACTCGATGTGATCAATACCCTAAAGCAGCATGGGGTCAGCATTAGCATTTATGAGCCGGCTTTAG
AAACTAACAGCTTTGAGGGCTGCCCAGTGATCAATGATTTGGCGCAGTTTAAACAGCAAAACGACTTGATTGTTGCCAAC
CGCTGGCATGATGAGTTATCCGATGTGAAAGACAAGGTTTACTCACGAGATGTGTTTGGCTATAGTTGA

Protein sequence :
MSNSDSTETASHLHPSSAHAAAIGLSKIVVIGAGYVGLSNAILLAQAHLHTQVMLFDIDQNKIQLLQQNQSPLQDTEICD
YLAHKPLNLTATMQAVIEDQGIYQASDLVIIATPTNYDVASGKFDTSSVEASIAAVRQQNATVPIVIKSTIPIGFTDNMR
QQFDNQILFMPEFLREGQALYDNLYPSRIIVGASLEQQDLASALMHLYQQASLAPEVATLMMPPTEAEAVKLFANSYLAT
RIAFFNELDSFAEKHQLNSQSIITGVGLDPRIGQHYNNPSFGYGGYCLPKDTQQLKANYAGIPANLIHAVVDANNTRKRF
IARQIIDKNPNQVGIYRLSMKKDADNFRDSAVLDVINTLKQHGVSISIYEPALETNSFEGCPVINDLAQFKQQNDLIVAN
RWHDELSDVKDKVYSRDVFGYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-83 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PsycPRwf_0275 YP_001279180.1 UDP-glucose/GDP-mannose dehydrogenase VFG0963 Protein 9e-88 50