Gene Information

Name : PsycPRwf_2385 (PsycPRwf_2385)
Accession : YP_001281275.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2972601 - 2973707 bp
Length : 1107 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
TTGGCTGAAAATAAGCCGCAAACTAGGGTTGAAAATGCGGCCAATCATGCCTTAGAAATAGGCTCAAATACACCCCCAAA
AAAGCAAGATATTTACTACATGAATTTGGCCATTGAAGAGGCCAAAAAAGGGCTGTTTACTACTAGGCCAAACCCTGCTG
TAGGCTGTGTTATTGTGAATAATAACTTAATAGTAGGCACGGGTTATCACCCTCAGGCAGGGCAGCCACATGCTGAAGTT
TTTGCCTTAAGAGAAGCGAAAGATAATGCAAAAGGTGCCACTGCCTATGTCACTTTAGAGCCTTGTAGCCATACCGGAAG
AACCCCACCTTGTGCCCAAGCTTTGATCAACTCAGGGGTATCTCGAGTAGTGGTGGCGGGGCTAGACCCCAATCCAAAGG
TGGCTGGTCGCGGTATAGCCATGTTAAAAGCGGCGGGTATTGAGGTGACAGTAGGCGTATCTACCCAGCAAGCAGAGCAG
TTGAATCTAGGCTTTTTAAAGGCCATGCGTACTCAAATGCCTTATGTGCGCCTAAAGATAGCCAGTAGCTTAGATGGCCG
TACAGCCATGGCATCGGGCGAGTCTAAGTGGATTACAGGCCCTGCAGCACGTGAGGATGTACAGAAGCTGCGGGCGCTCA
GTGGTGCCATTATTACCGGAAGCCAGACCATTATTGATGACAATCCCAGTCTAAATGTGCGCTCAAGTCAATTGGGGGTG
GCCTTAGATAAGGTGCCACAGCCTAAGATTGTGGTATTAGATAGAAGACAGCGGCTTGATCAGGCGCATTATAAAGTGTT
TGAGAGCCCAGACACTCTACTTTGGGCTGAGCATGATTTAACTGCCTTACTTCATCAGTTAGTGACTCAATATCAAGTAC
AAGATGTGCTTGTCGAAGCGGGATCACAGGTATCAGGCAGCTTCATTGAAGCGGGATTAGTGGATGAGCTTATTGTGTAT
CAGGCCCCGTGTTTATTGGGACACAGCGCAAAACCTATGTTGAACTTAACTGTGGATAACTTATTTTTGCAGCACAGGTT
TGAGCGAGTCAGCGTGTCTGAAGTAGGTTCAGATTTGAAGCTGGTATATAAGCCTGTATGCCAATAA

Protein sequence :
MAENKPQTRVENAANHALEIGSNTPPKKQDIYYMNLAIEEAKKGLFTTRPNPAVGCVIVNNNLIVGTGYHPQAGQPHAEV
FALREAKDNAKGATAYVTLEPCSHTGRTPPCAQALINSGVSRVVVAGLDPNPKVAGRGIAMLKAAGIEVTVGVSTQQAEQ
LNLGFLKAMRTQMPYVRLKIASSLDGRTAMASGESKWITGPAAREDVQKLRALSGAIITGSQTIIDDNPSLNVRSSQLGV
ALDKVPQPKIVVLDRRQRLDQAHYKVFESPDTLLWAEHDLTALLHQLVTQYQVQDVLVEAGSQVSGSFIEAGLVDELIVY
QAPCLLGHSAKPMLNLTVDNLFLQHRFERVSVSEVGSDLKLVYKPVCQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-85 56
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-85 56