Gene Information

Name : PsycPRwf_1944 (PsycPRwf_1944)
Accession : YP_001280834.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2422812 - 2423540 bp
Length : 729 bp
Strand : +
Note : PFAM: Integrase, catalytic region

DNA sequence :
ATGAGTCGAACCGCTTACTACTATAAGCCTAAGCTATCTGATGATAGTGAGATTATTGATGTCTTAAACAAGCTTACTGA
CAAGCACAATCGTTGGGGTTTCCCAAAGTGTTTTAAGCGTATACGCAAGCTTGGCTACTCATGGAATCACAAGCGAGTAC
ACCGTGTTTATACCACGTTAAACTTAAACCTACGCCGTAAGTCTAAAAGACGGCTACCAACACGTAATCCCCAGCCGCTA
AGTGTGCCAAACGCATTGGGGCATACTTGGTCTATGGACTTTATGAGCGATAAGCTGCACAACAATATTCGCTTTCGAAC
CTTTAATGTGATTGATGATTACAACCGTGAAGTATTAGGCATTGATATTGGCACCAGTATGCCTTCACTTAGAGTGATTC
GCTACCTTGATCAACTAGCTGAGTGGCATGGCTATCCTAAGCAAATTCGTGTGGATAATGGTAGTGAGTTTACCTCTAAA
GTGTTTACTGATTGGGCATCGGCTCACGGTATCTATATTGACTATATCGAGCCTGGCTGTCCTTATCAGAATGCTTATAT
TGAACGGTTTAATCGCAGTTATCGTAATGAGGTTTTAGACTGCTACCTTTTCAACAATTTAAACGAGGTTAGTAAGCTGA
CTGAGGATTGGATCACGGTTTATAACACCGAAAGACCCCATGATTCACTTAATGATATGACACCTGCTGAGTACAGACAG
GTGGCTTAA

Protein sequence :
MSRTAYYYKPKLSDDSEIIDVLNKLTDKHNRWGFPKCFKRIRKLGYSWNHKRVHRVYTTLNLNLRRKSKRRLPTRNPQPL
SVPNALGHTWSMDFMSDKLHNNIRFRTFNVIDDYNREVLGIDIGTSMPSLRVIRYLDQLAEWHGYPKQIRVDNGSEFTSK
VFTDWASAHGIYIDYIEPGCPYQNAYIERFNRSYRNEVLDCYLFNNLNEVSKLTEDWITVYNTERPHDSLNDMTPAEYRQ
VA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 3e-56 52