Gene Information

Name : PsycPRwf_1739 (PsycPRwf_1739)
Accession : YP_001280629.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2152551 - 2153237 bp
Length : 687 bp
Strand : -
Note : TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :

ATGTCAGAAATTTTAGTCGCAAAAGATATTAATAAAATCTACGATGAGGGCAATATCCGCACTCAGGTGTTGACCGGGCT
TAATTTAACCGTTAAAGCCGGTGAGCGCATTGCCATTGTAGGTACCAGTGGCTCAGGCAAAAGTACGTTGCTGCATTTAT
TGGGCGGGCTTGATGTACCAAGCTCAGGTGAAGTATGGCTACATGGTCAGTGTTTAAATAATATGAACGAAACTGAGCGC
GGTGAGATGCGCAATAAGCACTTAGGTTTTATTTATCAGTTTCACCATCTGTTGCCCGAATTTACCGCTATTGAGAACGT
GGCCATGCCGCTATTGCTACGTAAAGAGGTGCCTATTAAAGAGGCGCGCCAGCAGGCCGTGGACTTGCTTGAGCGAGTGG
GGCTTGGGCACAGATTAGAGCATCGCCCTGGTGAGTTGTCTGGCGGGGAGCGTCAGCGGGTAGCCATTGCTCGAGCCTTG
GTCACCAAGCCCTCGCTCGTCTTAGCGGATGAGCCGACAGGTAACTTAGATTATGACAATGCCCAAAGTATCTTTGCGCT
GTTGGCTGAGCTTCAAGACACCATGAAAACGGCGCTCCTTATGGTCACTCATGACAGAAATCTGGCGGCCATGGCCGATC
GTCAAATGCTGCTAAAAAACGGTAAGTGGGAAGCGTTTTCGGATTAG

Protein sequence :

MSEILVAKDINKIYDEGNIRTQVLTGLNLTVKAGERIAIVGTSGSGKSTLLHLLGGLDVPSSGEVWLHGQCLNNMNETER
GEMRNKHLGFIYQFHHLLPEFTAIENVAMPLLLRKEVPIKEARQQAVDLLERVGLGHRLEHRPGELSGGERQRVAIARAL
VTKPSLVLADEPTGNLDYDNAQSIFALLAELQDTMKTALLMVTHDRNLAAMADRQMLLKNGKWEAFSD

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-32	42
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-33	42
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-33	42
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	3e-33	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PsycPRwf_1739	YP_001280629.1	lipoprotein releasing system, ATP-binding protein	NC_012469.1.7686878.	Protein	3e-40	45
PsycPRwf_1739	YP_001280629.1	lipoprotein releasing system, ATP-binding protein	NC_008702.1.4606598.	Protein	2e-34	43
PsycPRwf_1739	YP_001280629.1	lipoprotein releasing system, ATP-binding protein	CP001581.1.gene598.p	Protein	8e-36	42
PsycPRwf_1739	YP_001280629.1	lipoprotein releasing system, ATP-binding protein	CP001581.1.gene798.p	Protein	4e-38	42