Gene Information

Name : PsycPRwf_1645 (PsycPRwf_1645)
Accession : YP_001280535.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 2033068 - 2034477 bp
Length : 1410 bp
Strand : -
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp

DNA sequence :
ATGTCAAACAAACTATTCGATCTAATCAAAGAGTCTAATGCCAAGTGGGTAGACTTCCGTTTTACTGATACGATCGGTAA
AGAGCAGCACATCAGCTATCCTGCCTCAAGCATCGATGAAGATGTTCTTGAAGATGGTAAAATGTTTGATGGATCATCTG
TTGCTGGCTGGAAAGGCATTGAAGCTTCTGACATGATTTTGCGTCCTGATCCAGAGACCGCATTTATCGACCCATTCTTT
GATGCGACAACCGTTGTGGTAACTTGTGACATCATTGAGCCTACCACCATGCAAGGCTATGACCGTGACCCTCGTTCAAT
CGCTCGCCGTGCTGAAGAGTATCTAAAATCAACTGGCATCGGTGATACGGCTTTCTTTGGTCCTGAGCCAGAGTTTTTCG
TATTTGATGACGTTAAATGGTCTATTGATATGTCAGGCGCGCGCCACCGTATCACAGCAGAAGAAGCAGCTTGGTCAACG
GATAATGAATACGATTGGGGCAACATGGGCCACCGTCCACGTGTAAAAGGCGGTTATTTCCCAGTACCTCCAGTAGATAG
CTCACAAGACTTGCGCTCAGTGATGTGTCAACGTTTAGAAGACATTATGGGCCCAGACCGTGTTGAGGTTCATCACCATG
AAGTGGCCTCTTGCCAATCAGAAATCGGTGTGTCATTTAACACCATGGTTCGTAAAGCGGACGAAGTACAGCAATTCAAA
TATGTGGTACATAACGTAGCGCACCAGTTTGGTAAAACAGCGACCTTTATGCCAAAACCAATCGTTGGTGATAACGGCTC
AGGTATGCACGTGCATATGTCAATCTCTAAAGATGGCGTAAATACTTTTGCTGGTGATGAGTATGCCGGTCTTTCAGAAA
CAGCGCTTTATTATATCGGTGGTATCATTAAGCATGCTCGCGCCCTTAACGCGATTGTTAACCCATCGACTAACAGCTAT
AAGCGTCTAGTACCTCATTACGAAGCGCCAATCATGCTTGCTTACTCAGCGCGTAACCGTTCAGCGTCTATCCGTATCCC
ATACGTCAGCTCACCAAAAGGTGTGCGTGTAGAAGCTCGCTTCCCTGATCCAACCGCTAACCCATATTTAGCATTTGCTG
CTTTATTAATGGCCGGCCTTGATGGTATCCAAAATAAAATCCATCCTGGAGATGCTGCTGATAAAAACTTGTATGATCTA
CCTCCAGAAGAAGAAGGTTCAATCCCAACTGTGGCCGAAAACTTAGAGGTCGCGCTACAAGCACTAAAAGATGACCATGA
CTTCTTACTAAAAGGTGATGTGTTCACTAAAGATATGCTAGATGCGTTTATCGAGTTAAAAACTGAAGAAGTACGTCGTC
TAAATACCACTGTGCATCCAGTAGAATTTGATATGTACTACAGCCTATAA

Protein sequence :
MSNKLFDLIKESNAKWVDFRFTDTIGKEQHISYPASSIDEDVLEDGKMFDGSSVAGWKGIEASDMILRPDPETAFIDPFF
DATTVVVTCDIIEPTTMQGYDRDPRSIARRAEEYLKSTGIGDTAFFGPEPEFFVFDDVKWSIDMSGARHRITAEEAAWST
DNEYDWGNMGHRPRVKGGYFPVPPVDSSQDLRSVMCQRLEDIMGPDRVEVHHHEVASCQSEIGVSFNTMVRKADEVQQFK
YVVHNVAHQFGKTATFMPKPIVGDNGSGMHVHMSISKDGVNTFAGDEYAGLSETALYYIGGIIKHARALNAIVNPSTNSY
KRLVPHYEAPIMLAYSARNRSASIRIPYVSSPKGVRVEARFPDPTANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDL
PPEEEGSIPTVAENLEVALQALKDDHDFLLKGDVFTKDMLDAFIELKTEEVRRLNTTVHPVEFDMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PsycPRwf_1645 YP_001280535.1 glutamine synthetase VFG1399 Protein 8e-98 49