|
Name : PsycPRwf_1539 (PsycPRwf_1539) Accession : YP_001280430.1 Strain : Psychrobacter sp. PRwf-1 Genome accession: NC_009524 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1883643 - 1884929 bp Length : 1287 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATCCTAAGTTATTACGCCAAGATTTAACTGAGCTAAAACAGAAGCTTGCCAAGCGTGGCTATGAGCTGGATGT GGATTTTTGGCAACAGATGGAGTCGCAGCGCAAATCGCTTCAGGTGATCACCGAAGACTTACAGGCCAAGCGTAATGCTG GGGCTAAGCAAGTGGGTGTGCTCAAGAAAAATGGGGAAGATGCCACTGAGCTACTGGCTGAGATGCAAAATATCAGCAGC GAGATGAAACAGGCTGAAGAGTCGCTAAAAGCGCTACAAGACAAGATTAATCAAGCGGCATTACAAATCCCAAATATTCC AGCCGATGACGTGCCAGAGGGCAGCTCTGAAGAGGATAACGTTGAAGTGCGTAAATGGGGCACGCCGCGTCAGTTCGACT TTAAGGTCCAAGAACACAGCGACTTAGGCGAGGTTTTGGGTCAATTAGACTTCGCTGCTGCTGCTAAGCTAACGGGTAGC CGCTTTAGCGTATTAAAGGGTCAATTGGCACAATTACACCGCGCCCTTATCCAGTTTATGCTCAACACGCATACCGTAAA ATACGGTTATACCGAGTGTTATGTCCCATATATCGTCAACTCAGATAGCTTAGAGGGTACTGGCCAGCTGCCAAAATTTG AAGAAGATTTATTTAAGCTGACCAACCACACCAACAATGAGGCAATGGGATTTTATCTGATCCCAACCGCTGAAGTGCCT ATGACCAACTTGGTACGTGGTGAGCGTCTAGATGCCAGTGAGCTGCCGCTAAAATTCACCGCACATACCCCTTGCTTTAG AAGTGAGGCCGGCTCGCATGGTCGTGACACCCGTGGCCTTATCCGTCAGCATCAGTTTGAAAAGGTGGAGATGGTCAATA TCGCTACCGCTGCACAATCTGATGAGCTGCTTGAGCAAATGACTGGCCAAGCTGAGTATATCTTGCAGCAATTACAGCTG CCGTATCGGGTGGTTAAGTTGTGTACTGGCGATATGGGGTTTAGCGCCCTGCGTACTTATGACATCGAAGTGTGGGTACC TAGCCAAGATACTTACCGTGAAATCTCAAGCTGTTCAAACTGTGGTGACTTCCAAGCCCGCCGCATGGGTACCCGTGTAA AAGAAGGCAAAAAAACTGAACTTGTACACACCCTAAATGGCTCTGGGCTTGCTGTGGGCCGCACCTTATTGGCGATTATG GAAAACCATCAAAACGCGGATGGCAGCATCACCATTCCAGAAGTACTGCGTCCTTATATGGGCGGTGCTGAGATTATTTC AGCCTAA Protein sequence : MIDPKLLRQDLTELKQKLAKRGYELDVDFWQQMESQRKSLQVITEDLQAKRNAGAKQVGVLKKNGEDATELLAEMQNISS EMKQAEESLKALQDKINQAALQIPNIPADDVPEGSSEEDNVEVRKWGTPRQFDFKVQEHSDLGEVLGQLDFAAAAKLTGS RFSVLKGQLAQLHRALIQFMLNTHTVKYGYTECYVPYIVNSDSLEGTGQLPKFEEDLFKLTNHTNNEAMGFYLIPTAEVP MTNLVRGERLDASELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFEKVEMVNIATAAQSDELLEQMTGQAEYILQQLQL PYRVVKLCTGDMGFSALRTYDIEVWVPSQDTYREISSCSNCGDFQARRMGTRVKEGKKTELVHTLNGSGLAVGRTLLAIM ENHQNADGSITIPEVLRPYMGGAEIISA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-105 | 55 |
