|
Name : PsycPRwf_0151 (PsycPRwf_0151) Accession : YP_001279061.1 Strain : Psychrobacter sp. PRwf-1 Genome accession: NC_009524 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 179959 - 181221 bp Length : 1263 bp Strand : - Note : PFAM: type II secretion system protein E DNA sequence : ATGTCCCGGCCCCCTTCGCTTAATCAACTAGCTGCCGCTCCCTCTGCGACTCTAGCACAGGCAGAGCATGGCGCGCATCA GCCTCATGATTTACAGCAAGATCCGGTAGTTCAGCTGGTACAGGATTTATTGTGTCAGGCAGTAGATAAAGGCGCCTCTG ACCTACACTTTGAGCCCTATGAGCATACGTTTCGGGTACGCTTTCGTATCGATGGCGTCATGCAGCAAGTGGCCACACCA GCGCTTGAGCTGCAAGCTAAGATATGTGCCCGCCTAAAGATTATGGCACAAATGGACATATCTGAGCGGCGTATGCCTCA AGATGGCCGTATTAGGCTGCAACTAAATGGGATGCCGACACTACACTTTCGTGCCAATGCTCTACCCACTTTGTTCGGTG AAAAAATTGTGCTTCGGGTTATTAATCCAGCCGCCTCGATTGCTGGTATTGATAGCCTCGGGCTTGAGCCTGAACAAAAA CAGCAGTTTTTACAAGCGCTACAGCAGCCGCAAGGTATCTTATTGATTACCGGCCCCACAGGCTCTGGCAAAACCTTATC GCTCTATACCGGTTTAGATATTTTAAACACGGTGGCCACCAATATCTGCACTGTAGAAGATCCGGTTGAAATTAATTTAA CAGGTATCAATCAGGTCACCGTCAATCCTAAAGTCGGACTGAGCTTTGCGGTGGCCTTAAAGTCATTTTTGCGCCAAGAC CCCGATGTATTAATGGTGGGTGAGATACGTGATTTTGAAACCGCGGATACTGCCATTAAAGCGGCACAAACTGGCCATTT GGTGCTCTCTACCCTGCACACCAACTCAGCTGCTGAGACCTTAACTCGCCTGCATCATATGGGCGTAGCTTACTTTAATA TTGCTACCGCCATTAGTCTGGTAGTGGCGCAGCGTCTGGCAAGATGCTTGTGCCGCCACTGCAAAATCCCTTGTGTGGTT CCTGAGGTAAGTCTCATTGAGATTGGCTTTAGCGCCGAAGAGTTGGCACAGCCTGAGCATATCATCTATAAGGCGGTGGG CTGTGATAAGTGCTGTGAGGGTTACAAAGGGCGCATCGGTGTGTTTGAGGTGATGCCCATGAACACGGCGCTTGCACAAG TGATTATGCAAGGTGCTAATGCCATTGAGATAAAAGCGGCTGCCACCGAGCAAGGCTTTTTTGACTTAAGGCGGGCCGCT ATTTTGAAAGTGCTTCAAGGCATCCTTAGCATTGAAGAAATGACCCGCATGACGGCCCAGTAA Protein sequence : MSRPPSLNQLAAAPSATLAQAEHGAHQPHDLQQDPVVQLVQDLLCQAVDKGASDLHFEPYEHTFRVRFRIDGVMQQVATP ALELQAKICARLKIMAQMDISERRMPQDGRIRLQLNGMPTLHFRANALPTLFGEKIVLRVINPAASIAGIDSLGLEPEQK QQFLQALQQPQGILLITGPTGSGKTLSLYTGLDILNTVATNICTVEDPVEINLTGINQVTVNPKVGLSFAVALKSFLRQD PDVLMVGEIRDFETADTAIKAAQTGHLVLSTLHTNSAAETLTRLHHMGVAYFNIATAISLVVAQRLARCLCRHCKIPCVV PEVSLIEIGFSAEELAQPEHIIYKAVGCDKCCEGYKGRIGVFEVMPMNTALAQVIMQGANAIEIKAAATEQGFFDLRRAA ILKVLQGILSIEEMTRMTAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-67 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-67 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PsycPRwf_0151 | YP_001279061.1 | type II secretion system protein E | VFG2426 | Protein | 1e-82 | 50 |
| PsycPRwf_0151 | YP_001279061.1 | type II secretion system protein E | VFG1876 | Protein | 2e-65 | 43 |
| PsycPRwf_0151 | YP_001279061.1 | type II secretion system protein E | VFG0182 | Protein | 9e-67 | 43 |
| PsycPRwf_0151 | YP_001279061.1 | type II secretion system protein E | VFG2048 | Protein | 5e-68 | 42 |
