Gene Information

Name : PsycPRwf_1429 (PsycPRwf_1429)
Accession : YP_001280324.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1752505 - 1753140 bp
Length : 636 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver

DNA sequence :
ATGATTAAAGTTTTGGTGGTTGATGATCATGACCTCGTAAGAATGGGGATTAGTAGAATGCTCGCTGACGACCCCGAGAT
TGAAGTAATAGGTGAGGCTGATAGTGGCGAAGCTGCGATTAGAATGGTTAAAGCGCTATCCCCAGATGTGGTACTCTTAG
ATGTAAACATGCCTAATATTGGCGGTGTAGAAACCACAAAACGCTTGCGTCAATTTGATGAAAAGGTAAAAATATTAGCG
GTCAGTAGTGTCTCCTCACAGCCCTACCCCTCTATGTTATTAAAGGCGGGGGTTAATGGCTACATTACCAAAGGTACACC
ACTTGATGAGATGATTAAAGCCATTAAAAAAGTGTATCAAGGCAGCAAGTACTTTAGCAGTGATGTCGCTGAGCAGTTGG
CCGATATGCTACTGACAGACAATGAAGAATCCCCTTTTGATAGATTAAGCGAGCGCGAAAAACAAGTGGCAATGATGGTA
GTCAACTGTCAAAGCCCGCAGCAAATAGCCGATCAGCTTTTTGTGAGCGTAAAAACTGTTAACACTTATCGCTACCGAAT
TTTTGAAAAAGTCGGTGTCGACAGTGATGTAAAACTCACTCATTTAGCAATGCGTCATGGACTGATTACCCCTTAA

Protein sequence :
MIKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNIGGVETTKRLRQFDEKVKILA
VSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQGSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMV
VNCQSPQQIADQLFVSVKTVNTYRYRIFEKVGVDSDVKLTHLAMRHGLITP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 4e-72 70
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 4e-72 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PsycPRwf_1429 YP_001280324.1 two component LuxR family transcriptional regulator VFG1889 Protein 2e-52 51