Gene Information

Name : PsycPRwf_0139 (PsycPRwf_0139)
Accession : YP_001279049.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 168080 - 169018 bp
Length : 939 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein

DNA sequence :
ATGAGTCGTGATCGCGCCATACAACCCAGACAGCCCAAAGCCCTTGCGGTGGATGATGAGCCCGCTTATATCACCGAGTT
TCGTCAGGCGATGCTAGCACGTGGTCTGTCTACGCGCACTCGTAATGCCTATGTGCGTGATTTAAAGCTGTGCGAGACCA
CCCATTCTAAAGCGCTAACGCTGTGGTCAGACATGGATGTGATGCAGTGTTTAACGGCGCTAGATAGACAAGGAAAAACG
CCACGCACCCAAGCGCGTATGCTCTCAAGCTTGCGTCAGTTCTACTTATGGATGGTGGGCAATGAGCGCCGTGAAGACAA
CCCATGCGAGCGTATCAAAACACCCAAGATTGGCCGATCTTTGCCCAAGGATTTGTCCGAAAACGATGTCGAAAGCCTGC
TGTCTGCCCCCGATACCAGTACCGCCCTTGGTCTGCGTGATAAGGCCATGCTTGAGGTGCTCTATGCTTGCGGGCTTCGG
GTCAGTGAGCTGATGAACTTATCTTTAGAGCAGGTCAATTTAAATGCCGGCTGGCTACAAATCACCGGTAAAGGCAATAA
AACCCGCTTGGTGCCTTTGGGTGAGTATGCCAGTGACGCCTTGGATGATTATTTGACTCATGCCCGAGGCGAGCTGGTGG
CACATTTAAAATCAGGTAACTGCCAAGCAGTGTTTTTGACCACCCAAGGCGGCTATATGACCCGCCAGAACTTTTGGTAC
ATGATAAAAAAATATGCCAAACAAGCAGGCATCCAAAGCGACTTATCTCCGCATACCTTGCGGCACGCTTTTGCCACGCA
TTTACTTAATCACGGTGCTGACTTACGTAGCGTACAGCTGCTACTGGGCCACAGTGACTTATCTACCACTCAGATTTATA
CCCATGTGGCCACGGCTCGATTGCAGCAGCTTCATGAAGCGCATCATCCCAGAGGCTAG

Protein sequence :
MSRDRAIQPRQPKALAVDDEPAYITEFRQAMLARGLSTRTRNAYVRDLKLCETTHSKALTLWSDMDVMQCLTALDRQGKT
PRTQARMLSSLRQFYLWMVGNERREDNPCERIKTPKIGRSLPKDLSENDVESLLSAPDTSTALGLRDKAMLEVLYACGLR
VSELMNLSLEQVNLNAGWLQITGKGNKTRLVPLGEYASDALDDYLTHARGELVAHLKSGNCQAVFLTTQGGYMTRQNFWY
MIKKYAKQAGIQSDLSPHTLRHAFATHLLNHGADLRSVQLLLGHSDLSTTQIYTHVATARLQQLHEAHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-83 59
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-83 59