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Name : PsycPRwf_1393 (PsycPRwf_1393) Accession : YP_001280288.1 Strain : Psychrobacter sp. PRwf-1 Genome accession: NC_009524 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 1709589 - 1710416 bp Length : 828 bp Strand : - Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGACCTTAGTATCTGACTTAGCCCTCCCTAAGCCAAAAGTACATATTGTAATTCCAGCCCGCTTTAAGAGCACCCGTTT GCCCGGTAAGCCGCTATTAGAGATTCATGGTAAACCTATGATTCTTTGGGTGGCACAAAAAGCCAGTCAAGCTACCTTTG CGGATGACTTGTGTATTGCCACTGATGATGAGCGCATTGCAGCAGTATGCCAGCAAGCTGGTTATGAGGTAGTGATGACC GATGCCCATCATGCCTCAGGTACCGATAGACTCAGTGAGGTGGCACAAAAAAAAGGCTGGGACGCAGAGGATATCGTGGT CAATATGCAAGGTGATGAGCCTTTGGTGCCGCCACAGCTATTAGAGCAGGTCAAAGACTTGTTAGTAAATAAACCCGATT GCGTGATGGCCACCTTATATGAGCTTATCTTGGATTATCAAGAATTCATACGTCCTTCGGTCGTCAAAGTGGTGACTGAT AACTTAAAGCATGCCCTATACTTTAGTCGTGCGCCTATCCCTTGTGATAGAGATCATGCGATGGCGATGGTGCAGCAGCC TGAGGGATCGCATCAGCCACCGCTGACAGTGCCTAAGCAGGCTTACCGTCATCTAGGTATCTATGCGTATCGTGTAAAAC TACTGCAAGACTTTGTGCGCTGGTCGCCGGGCATCTTGGAGAATTTAGAGAGCTTAGAGCAACTTCGGGTGCTTGAAAAT GGAGGCAAAATTGCCATCGAAGCTGCCTCGGTTCAGCTGCCGCCAGGAGTAGATCTGCAAGAGGATTTAGACCGTCTTAA CGCATTGCCGATTAGCGAGCTACAGTAA Protein sequence : MTLVSDLALPKPKVHIVIPARFKSTRLPGKPLLEIHGKPMILWVAQKASQATFADDLCIATDDERIAAVCQQAGYEVVMT DAHHASGTDRLSEVAQKKGWDAEDIVVNMQGDEPLVPPQLLEQVKDLLVNKPDCVMATLYELILDYQEFIRPSVVKVVTD NLKHALYFSRAPIPCDRDHAMAMVQQPEGSHQPPLTVPKQAYRHLGIYAYRVKLLQDFVRWSPGILENLESLEQLRVLEN GGKIAIEAASVQLPPGVDLQEDLDRLNALPISELQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 4e-32 | 41 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 8e-32 | 41 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 3e-32 | 41 |
