|
Name : PsycPRwf_1358 (PsycPRwf_1358) Accession : YP_001280253.1 Strain : Psychrobacter sp. PRwf-1 Genome accession: NC_009524 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1652166 - 1652792 bp Length : 627 bp Strand : + Note : PFAM: Integrase, catalytic region DNA sequence : ATGGTTCGGCAAATCAAGCAAGAACATGGTATTTACTGCAAACGCCACAAGCGATCTAAGGTGACTACTGACTCAAATCA TAATAAGCCTGTGTATCCAAACTTGTTAGAACAGCAGTTTGACGTGGCAGCACCCAATATCGCTTGGGTTAGCGATATTA CCTATATTTGGACCAATGAAGGCTGGGTGTACTTGGCAGCGTTCAAAGACTTGTACAGCAAAGAGATTGTGGGATATGCT CTAAATAAGCGTATGACCGCTGATTTGGTTTGTGAGGCTTTAAACAATGCCATTAAGTACAAACGCCCTGCTCGGGGCTT AATCGTGCATTCTGACAGGGGTAGTCAGTATTGTAGCCATCAATACCGCCAAATCATCGACAAGTATGGTTTTGCTGGCT CTATGAGCCGAAAAGGCAATTGCTACGATAACGCCCCGATTGAAAGCTTCTGGGGTCAGTTAAAAAACGAGCTGATTTAT CACAAAGTCTATGAGACTCGTGATGAAGCCATTAAGGATGTGGTTAGATATATTGAGATTTTTTACAACCGTCAACGAAT ACAAAAAGGGTTAGGATTTAAGTCACCTACTCAAGTATTCCAAGACTTTTACCGTCAGGCTGCCTGA Protein sequence : MVRQIKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYA LNKRMTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIY HKVYETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 1e-48 | 55 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 1e-48 | 55 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 1e-48 | 55 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 1e-48 | 55 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 1e-48 | 55 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 8e-49 | 55 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 1e-48 | 55 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 1e-48 | 54 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 1e-47 | 54 |
| CDC7B_2039 | YP_005163480.1 | transposase-like protein | Not tested | Not named | Protein | 5e-26 | 41 |
| CDCE8392_1961 | YP_005134492.1 | transposase-like protein | Not tested | Not named | Protein | 5e-26 | 41 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 2e-28 | 41 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 1e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PsycPRwf_1358 | YP_001280253.1 | integrase catalytic subunit | VFG1706 | Protein | 4e-49 | 55 |
