|
Name : PsycPRwf_1315 (PsycPRwf_1315) Accession : YP_001280210.1 Strain : Psychrobacter sp. PRwf-1 Genome accession: NC_009524 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1612049 - 1612903 bp Length : 855 bp Strand : + Note : PFAM: Integrase, catalytic region DNA sequence : ATGCAAGAGAATCGATTGAAATACTGCATACAACGTATGGCGACCGTATTTGAAGTCAGCCTATCAGGCTACTATGACTG GCTAAAGCGAGGCATGAGCAAGCGAAAACAGCACCACAATCGCTGTGAGTTACTGGTCAAATCCGCTCATATGGATACAC AGCAAAGCTATGGGCATGAACGCTTGCATCAGCATTTAACCAGCCAAGGACACGACATCAGCCTGTACATGGTTCGGCAA ATCAAGCAAGAACATGGTATTTACTGCAAACGCCACAAGCGATCTAAGGTGACTACTGACTCAAATCATAATAAGCCTGT GTATCCAAACTTGTTAGAACAGCAGTTTGACGTGGCAGCACCCAATATCGCTTGGGTTAGCGATATTACCTATATTTGGA CCAATGAAGGCTGGGTGTACTTGGCAGCGTTCAAAGACTTGTACAGCAAAGAGATTGTGGGATATGCTCTAAATAAGCGT ATGACCGCTGATTTGGTTTGTGAGGCTTTAAACAATGCCATTAAGTACAAACGCCCTGCTCGGGGCTTAATCGTGCATTC TGACAGGGGTAGTCAGTATTGTAGCCATCAATACCGCCAAATCATCGACAAGTATGGTTTTGCTGGCTCTATGAGCCGAA AAGGCAATTGCTACGATAACGCCCCGATTGAAAGCTTCTGGGGTCAGTTAAAAAACGAGCTGATTTATCACAAAGTCTAT GAGACTCGTGATGAAGCCATTAAGGATGTGGTTAGATATATTGAGATTTTTTACAACCGTCAACGAATACAAAAAGGGTT AGGATTTAAGTCACCTACTCAAGTATTCCAAGACTTTTACCGTCAGGCTGCCTGA Protein sequence : MQENRLKYCIQRMATVFEVSLSGYYDWLKRGMSKRKQHHNRCELLVKSAHMDTQQSYGHERLHQHLTSQGHDISLYMVRQ IKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYALNKR MTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIYHKVY ETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 9e-61 | 51 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 9e-61 | 51 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 8e-61 | 51 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 1e-60 | 51 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 1e-60 | 51 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 1e-60 | 51 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 4e-59 | 50 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 6e-60 | 50 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 1e-60 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PsycPRwf_1315 | YP_001280210.1 | integrase catalytic subunit | VFG1706 | Protein | 4e-61 | 51 |
