Gene Information

Name : PsycPRwf_1192 (PsycPRwf_1192)
Accession : YP_001280091.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1456409 - 1457935 bp
Length : 1527 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase

DNA sequence :
ATGCTTTACCAAACCCCAAATACTGACAATAGCTTGGTTAAATTCCGCGAAAAATACGATAACTTTATTGGCGGAGAGTG
GGTTGCTCCCATTGATGGTGAGTATTTTGATAACACCAGTCCTATCGACGGCAAACTCATTTGCCAAGTTGCCCGTTCAA
AAGCTGCCGACATCGAAAAAGCCCTAGATGCTGCACATGCGGCCAAAGAAGCTTGGGGCAAAACCAGTGTCACAGAGCGC
TCAAATATCCTGCTAAAAATCGCTGACAAGATGGAAGAAAATCTTGAAAAAATCGCGGTGGCCGAATGTTATGAAAACGG
CAAACCAGTTAGAGAAACCCTAGCAGCAGATATCCCTTTATCTATCGATCATTTGCGTTATTTTGCCGGCGCCATCCGTG
CCCAAGAAGGCGGCATCAGTCAAATTGATGAAGATACCGTAGCCTATCATTTCCATGAGCCCTTAGGTGTGGTCGGTCAG
ATTATCCCTTGGAACTTCCCTCTACTTATGGCGATTTGGAAAATTGCTCCGGCATTGGCTGCAGGTAACTGTATCGTACT
TAAGCCGGCTGAGCAGACGCCTGCCTCAATCTTGTATTTAATTGAAACCATTGGGCTGGCAGACATCTTGCCAAAAGGCG
TATTAAACGTGGTCAATGGCTTTGGGGTAGAGGCAGGCAAGCCACTTGCGTCAAACCCTCGTATTAGCAAAATCGCTTTC
ACAGGTGAAACCACCACCGGTCGCCTAATCATGCAATACGCCAGTGAAAATATTATTCCTGTTACGCTAGAGCTTGGTGG
TAAGAGTCCTAATATCTTCTTTGCAGACATCATGGATGAAGACGATGATTTCTTAGACAAGGCGGTAGAGGGTCTGGTGA
TGTTTGCGCTCAACCAAGGTGAGGTCTGTACGTGCCCTTCACGTGCACTGGTGCATGAGAGCATTTATGATGAATTTATC
AAACGCTGTATTGAGCGCGTTAAAGCCATTAAACTTGGCAACCCGCTAGATACCGAAACCATGGTCGGTGCCCAAGCCAG
CTCAGATCAGTTAGAAAAAATCTTATCTTATCTAGATATTGGTAAAAAAGAAGGTGCTAAAGTACTGGTCGGCGGTGAGC
AGGCCAAGCATGAAGGCGATCTTGCCAGCGGCTATTATGTGCAGCCTACTATCTTTGAGGGCACCAACGACATGCGCATT
TTCCAAGAAGAAATCTTTGGACCTGTGCTGGCGGTAACTACCTTTAAGGATGATGAGGAAGCATTACGCTTGGCTAACGA
TACCTTGTATGGCTTAGGCGCAGGTATCTGGACCCGCAACGTGCATAAAGCTTATCGCTTTGGCCGTGGCATCCAAGCAG
GCCGTGTATGGACCAACTGCTACCACCTATATCCGTCACACGCAGCCTTCGGTGGCTACAAGCAGTCAGGTATTGGTCGT
GAAAACCATCTAATGATGCTAGATCATTATCAGCAAACCAAAAATATGCTGGTCTCTTATAGCACCAAGGCGATGGGCTT
CTTTTAA

Protein sequence :
MLYQTPNTDNSLVKFREKYDNFIGGEWVAPIDGEYFDNTSPIDGKLICQVARSKAADIEKALDAAHAAKEAWGKTSVTER
SNILLKIADKMEENLEKIAVAECYENGKPVRETLAADIPLSIDHLRYFAGAIRAQEGGISQIDEDTVAYHFHEPLGVVGQ
IIPWNFPLLMAIWKIAPALAAGNCIVLKPAEQTPASILYLIETIGLADILPKGVLNVVNGFGVEAGKPLASNPRISKIAF
TGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADIMDEDDDFLDKAVEGLVMFALNQGEVCTCPSRALVHESIYDEFI
KRCIERVKAIKLGNPLDTETMVGAQASSDQLEKILSYLDIGKKEGAKVLVGGEQAKHEGDLASGYYVQPTIFEGTNDMRI
FQEEIFGPVLAVTTFKDDEEALRLANDTLYGLGAGIWTRNVHKAYRFGRGIQAGRVWTNCYHLYPSHAAFGGYKQSGIGR
ENHLMMLDHYQQTKNMLVSYSTKAMGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 1e-102 63
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 1e-102 63
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 8e-103 63
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 1e-102 63
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 1e-102 63
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 1e-102 63
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-145 63
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 9e-103 63
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 1e-101 62
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-155 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-154 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PsycPRwf_1192 YP_001280091.1 aldehyde dehydrogenase VFG0082 Protein 9e-146 63