|
Name : RoseRS_0463 (RoseRS_0463) Accession : YP_001274838.1 Strain : Roseiflexus sp. RS-1 Genome accession: NC_009523 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 588748 - 590922 bp Length : 2175 bp Strand : - Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein DNA sequence : ATGTCAACCCAAGAACTCATCACCCAACTTCGCACCCGCCCTGGGGTGCTTGCCGTTCATTACGACGAGCAGGAACGTGT GTTGACCTTGCGGTATGACGGCGGTCGCGTCAATGTAGCAGATATCGAGGCGCTCGCCCGCAGCGCCGGTGCGACGCTGC GCATGCTGCCCGCCGAAACCCGCCCGTTGACGCCGGAAGAGGCGGAACTGGCGGCGTTGCCCTGGATGATCCGCCTGACC ACGCTGACCCTGGTGATGGTCATTGTCGGCTGGGTCGTCGAGGATTTCACGACGCTGCCACGATGGGTCGCCTGGCTGTC GTATGCCGTTGCGTATGCCAGCGGCGGGTTCTACAGCATCCAGGAGGCCTGGGAAACGCTGCGCAAGCGTCAGTTCGATG TCAACTTTTTGATGATTGTTGCAGCGGTTGGCGCCGCGATTGTCGGGCAACCCCGCGAGGGCGCTATTCTGATGTTCCTG TTTTCGCTCTCTGGTACGCTCGAAACATATGCGATGGGGCGCACCCACGCTTCCATCCGTGCACTGCTCGATATGACGCC GAAAGAAGCGGAGGTGTACCGCGATGGAACTCTCGTTCGCGTGCCGGTCGAGGAGGTGCAGGTCGGCGAGATTGTGCTGG TGCGCCCCGGTGCGCAGGTCCCCGCTGATGGCGTGGTTGTGCGCGGCGAGTCGGCGCTGAACGAAGCGTCGATCACCGGC GAGTCGATGCCGGTTGAGAAACGACCCGGTGCGAAGGTGTTTGCCGGGACGATCAACGGGCAGGGCGCACTTGAGGTGCG CGTAACGACTTCCGTCGAAAACTCGACGCTGGCGCGGATCGTGCAGGTGGTGCGCGAGGCGCGTGAACAGAAGGCGAAGA GTCAGGATTTCACCGACCGGGTGATCGGTCAGTACTATGCCTATGCGGTGGTCGGGCTGACGCTGCTGGCGATCATTGTT CCGCTGCTGTTCCTGGGATGGGATCTGAAGACAACCCTCTACCGTGCGATGACGTTGATGGTCGTGGCGTCGCCGTGCGC CCTGGTCATTTCAATCCCGGCGGCGCTCCTCTCTGCGCTTGCTTCCGCAGCCCGCGGCGGCGTTCTGTTCAAAGGCGGGC GGCACCTGGAAGCAGCAGCGCAGGTGCGGGTCGTGGCGTTCGACAAAACCGGCACCCTCACCACCGGACGCCCTGGCGTC GTGGCGGTCATTCCGGTCGATGGCGCCCCTGCCAGCCTGGAAGAGGCGTTTATCGGCGTCGATGCACCAGAACATCCGGC GCAAGCGATCCCTGATGACCAGATCGGACCGTTGACACCCGAACAGCGCTGGTTGCTGGCGCTGGCAGCCGCCATCGAAC GCCCGTCGGAGCACCCGCTGGCGCGGGCTATTGTGCGCGGCGCCGATGAGCGCGGTCTGCCGGTGATCGAGGCGTCGGGC TTCGAGGCGTTGACCGGCGCCGGCGCGGCGGCAACCATCCACGGGCAGCGCCTGACGATTGGACGCCCGATGCTGTTCGA CCTGTCGCCAGACCTGATGGAGCAGATCGCTACACAGCAGGAACTGGGGCGAACGGTCGTGGCGTTGGGAAGCGGGCGCA CAGTGTGGGGCATCATTGCAATCGCCGACACAGTGCGCCCCGAAGCAGCGGCGGCAGTCGCCCGGTTGAAGCGCACCGGC ATCGAGCGGGTGGTGCTGCTGACCGGCGACAATCATCAGGTGGCGCAGGCGATCGGGCAGGCGCTCGGTGTGGACGAGGT GCACGCTGAGTTGCTCCCGGAGCAGAAAGTCGCCGTGCTGCGCGAACTTGAGCAACGCTACGGACCGGTCGCCATGATCG GCGATGGCGTCAATGACGCGCCTGCGCTGGCAAGCGCGACGCTCGGCGTGGCTATGGGCGCTGCCGGGACCGATGTGGCG CTGGAGAGCGCCGACATGCTGTTGATGAGCGACGATCTGAGTCGTCTGCCGGGGGCATTGCGGCTGGCGCGGCGCGCGCG GGCCATCGTGCGCCAGAACCTGGCATTCGCTTTTACCGTGATAGCGGTGCTGATGGTCTTCGCCATGTTCGGCGCCATTC CTCTGACCCTTGGCGTTATCGGGCACGAGGGGAGCACACTGATCGTCGTGGCGAATGGTCTGCGGTTGCTGGCGGAACGA ATTCAACACGGATGA Protein sequence : MSTQELITQLRTRPGVLAVHYDEQERVLTLRYDGGRVNVADIEALARSAGATLRMLPAETRPLTPEEAELAALPWMIRLT TLTLVMVIVGWVVEDFTTLPRWVAWLSYAVAYASGGFYSIQEAWETLRKRQFDVNFLMIVAAVGAAIVGQPREGAILMFL FSLSGTLETYAMGRTHASIRALLDMTPKEAEVYRDGTLVRVPVEEVQVGEIVLVRPGAQVPADGVVVRGESALNEASITG ESMPVEKRPGAKVFAGTINGQGALEVRVTTSVENSTLARIVQVVREAREQKAKSQDFTDRVIGQYYAYAVVGLTLLAIIV PLLFLGWDLKTTLYRAMTLMVVASPCALVISIPAALLSALASAARGGVLFKGGRHLEAAAQVRVVAFDKTGTLTTGRPGV VAVIPVDGAPASLEEAFIGVDAPEHPAQAIPDDQIGPLTPEQRWLLALAAAIERPSEHPLARAIVRGADERGLPVIEASG FEALTGAGAAATIHGQRLTIGRPMLFDLSPDLMEQIATQQELGRTVVALGSGRTVWGIIAIADTVRPEAAAAVARLKRTG IERVVLLTGDNHQVAQAIGQALGVDEVHAELLPEQKVAVLRELEQRYGPVAMIGDGVNDAPALASATLGVAMGAAGTDVA LESADMLLMSDDLSRLPGALRLARRARAIVRQNLAFAFTVIAVLMVFAMFGAIPLTLGVIGHEGSTLIVVANGLRLLAER IQHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 2e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RoseRS_0463 | YP_001274838.1 | heavy metal translocating P-type ATPase | BAC0092 | Protein | 2e-99 | 45 |
| RoseRS_0463 | YP_001274838.1 | heavy metal translocating P-type ATPase | BAC0124 | Protein | 2e-84 | 44 |
| RoseRS_0463 | YP_001274838.1 | heavy metal translocating P-type ATPase | BAC0099 | Protein | 3e-83 | 42 |
| RoseRS_0463 | YP_001274838.1 | heavy metal translocating P-type ATPase | BAC0100 | Protein | 3e-60 | 41 |
