Gene Information

Name : RoseRS_0408 (RoseRS_0408)
Accession : YP_001274789.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 519011 - 519517 bp
Length : 507 bp
Strand : -
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein

DNA sequence : 
ATGGAACGTGCGAACGCCTTCGACTTCTTGGGTCCGAGAACGCTGGTGGGTCCTGAACTGAAGCCGGGTGATCGAGCGCC
CGCATTTAAGCTGACGACCGGAAAAGCAACGATCAGCAGTGAGCAGTTTGCTGGCAAGCCGCTGGTGATCAGCGTCATTC
CGTCGATCGATACCGGCGTCTGTTCCAAACAGACCCGGCGGTTCAACGAAGCAGCGGCGGAACTCGGCGATGCGGTCAAC
ATCCTGACGGTCAGCGCCGATCTGCCGTTTGCCCAGGGGCGCTGGTGCGGCGCTGAGGGGGTGGATAAAGTCATTATGGC
GTCTGATCACCTGGATATGAGTTTTGGCGCCGCCTACGGCACGTATGTCAAAGAATTGCGCATCGAAAGCCGGGCGGTGT
TCGTGGTGGACAAAGATGGCATCATCCGCTACGCTGAATATGTGCCGGTTGCCGGTCACGAACCGAACTACGACGCGGCG
CTGGCAGCATTGAAGGAACTCTTGTAA

Protein sequence : 
MERANAFDFLGPRTLVGPELKPGDRAPAFKLTTGKATISSEQFAGKPLVISVIPSIDTGVCSKQTRRFNEAAAELGDAVN
ILTVSADLPFAQGRWCGAEGVDKVIMASDHLDMSFGAAYGTYVKELRIESRAVFVVDKDGIIRYAEYVPVAGHEPNYDAA
LAALKELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-18 42
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-18 42
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 5e-18 41
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RoseRS_0408 YP_001274789.1 redoxin domain-containing protein VFG0087 Protein 1e-18 42