Gene Information

Name : RoseRS_3564 (RoseRS_3564)
Accession : YP_001277871.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4559
EC number : -
Position : 4463369 - 4464193 bp
Length : 825 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGTCCGCTCCTCTGATCGAAGCGTGTGCGCTCAGTTATTACGCCGGTGATCGCTGCCTGCTCGATGCCGTGTCACTGAC
GGTCAATGGTGGCGAAGTTGTGGCAATCGTCGGTCCGAACGGCGCCGGGAAGAGTACATTGATCAGTCTGCTTGCCGGTG
ATCTCCCTCCGACCGCCGGTCGTGTGCTGCTCGGAGGCATCCCGCTGGAACGGATGCGCGCCGGTGATCAGGCGCTACGG
CGATCAGTTCTCCGTCAGCGAATTCATGTGGCGTTGCCCTTTACCACCTTCGAGGTGGTGCTCATGGGGCGCACACCGCA
CCTTCGCGGACGATCCGAGGGGCGAGAGGATGTCGTTATTGTTCAGAACGCCCTGAACCGTACCGGGATGGCGCCGTTTG
CGGAACGGCTGTTTCCAACCCTCTCCGGGGGTGAACAGACCCGTGCCAGCCTTGCGCGCGTGCTGGCGCAGCAGGCGCCG
CTTGTGTTGCTCGATGAACCGACCGCTGCGCTCGATCTGCGTCATCAGCATGCGGCGCTGCGCCTGGCGCGCGCAGTAGC
TGCCAGCGGCGGCGCCGCCGTGATCGTCCTGCACGACCTCAACCTGGCAGCCGGGTATGCTGACCGGATCGGCATTCTGC
ACGAAGGGCGATTGGTTGCGATTGGCGCGCCATGGGATGTGCTGCGCCCGGAATTGTTGAGCGCTGTGTACGGTATTCCG
ATCGTCGTTCACCCGCACCCGCACACAGGCGCCCCGCTGTTGCTCACCCTTCCCGATGTTCCTTCGTCAGGACAAGGAGG
CGTCTATGAAGTCCTGGAAGCCTGA

Protein sequence : 
MSAPLIEACALSYYAGDRCLLDAVSLTVNGGEVVAIVGPNGAGKSTLISLLAGDLPPTAGRVLLGGIPLERMRAGDQALR
RSVLRQRIHVALPFTTFEVVLMGRTPHLRGRSEGREDVVIVQNALNRTGMAPFAERLFPTLSGGEQTRASLARVLAQQAP
LVLLDEPTAALDLRHQHAALRLARAVAASGGAAVIVLHDLNLAAGYADRIGILHEGRLVAIGAPWDVLRPELLSAVYGIP
IVVHPHPHTGAPLLLTLPDVPSSGQGGVYEVLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RoseRS_3564 YP_001277871.1 ABC transporter-like protein BAC0164 Protein 3e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RoseRS_3564 YP_001277871.1 ABC transporter-like protein VFG1042 Protein 3e-23 41