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Name : RoseRS_3466 (RoseRS_3466) Accession : YP_001277774.1 Strain : Roseiflexus sp. RS-1 Genome accession: NC_009523 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4345391 - 4346665 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGGACATTCGACTGATCCGTGAGCAACCCGATCTGGTTAAAGCGTCGCTCGGGCGAACCGGCGTCGATCCGGCGCA GGTCGATGCGGTGCTGGCATACGACGAGCAACGCCGCGCGCTGCTGCGTGAGGTGGAACAACTCAAAGCGTTGCGGAATG CAGTCTCGAAAGAGATCGGCAAAATGAGCGATGCGGCCGCACGCGACGCGAAGATCGCCGAAATGCGCGCCGTCGGTGAT CGCATTGCCGAACTGGACCGCGAACTTGCAGCGGTCGAAGAACAGCAGTACGCTGCGCTCATGGAACTGCGCAACCTGCC GCACCCCTCGGTTCCCGACGGACCCGACGAGACGTACAACGTGGTGATTGCGCAGGAAGGCGAACCGCGCACCTTCGATT TCACCCCCAAACCGCACTGGGAACTGGGTGAGGCGCTCGACATCATCGACTTCGAGCGGGGCGTCAAACTGTCGGGATCG CGCTTCTACGTGCTCAAAGGACCGGGCGCCCGCCTGCAACGCGCTCTCATCCAGTGGATGCTCGACCTGCACGGCAAACA GGGATACGACGAGGTCTACACGCCGTTTGTGGTCAAAGAGCAGTGTATGTGGGGCGCACGTCAACTGCCCAAGTTCCGCG ACAACCTCTACCGTGACGTGGAAGATGACCTGTGGCTGGTGCCAACTGCCGAGGTGCCGGTGACCAATCTGCACCGCGAT GAAATCCTGGACGCCGACCAGTTGCCATTGCGCTATTGCGCGTACACCCCCTGCTTCCGTCGTGAGAAGATGAGCGCCGG GCGCGACGTGCGCGGTATCAAGCGCGGGCATCAGTTCGACAAGGTCGAAATGTACATGTTCGTTCGCCCGGAGACCAGTT ACGATGAACTCGAAAAACTGCGCGCCGACGCCGAGGAAACCTGTCGCCTGCTGGGATTGCCCTTCCGCACCAAGGAACTC TGCACCGGCGACCTGGGGTTTGCCGCCACACGCACCTACGACATCGAAGTCTGGGCGCCGGGCCAGGGCGAGTGGCTCGA GGTCAGTTCCTGTTCAAACGTCGAAGCCTTTCAGGCGCGTGCAGCGAATATCCGCTACCGTCCGGAACCCGGCGCGCGCC CCGAGTATGTTCACACGCTGAATGGCTCAGGATTGGGCTTGCCGCGCACCCTCATCGCCATTCTCGAAAACTATCAGCAG GCGGACGGCAGCGTTGTCATCCCCGAGGTGCTGCGCCCGTACATGGGCGGTATCGAAGTCATTCGCCGGACATGA Protein sequence : MLDIRLIREQPDLVKASLGRTGVDPAQVDAVLAYDEQRRALLREVEQLKALRNAVSKEIGKMSDAAARDAKIAEMRAVGD RIAELDRELAAVEEQQYAALMELRNLPHPSVPDGPDETYNVVIAQEGEPRTFDFTPKPHWELGEALDIIDFERGVKLSGS RFYVLKGPGARLQRALIQWMLDLHGKQGYDEVYTPFVVKEQCMWGARQLPKFRDNLYRDVEDDLWLVPTAEVPVTNLHRD EILDADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVRPETSYDELEKLRADAEETCRLLGLPFRTKEL CTGDLGFAATRTYDIEVWAPGQGEWLEVSSCSNVEAFQARAANIRYRPEPGARPEYVHTLNGSGLGLPRTLIAILENYQQ ADGSVVIPEVLRPYMGGIEVIRRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-98 | 52 |
