Gene Information

Name : RoseRS_3401 (RoseRS_3401)
Accession : YP_001277709.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4275220 - 4275675 bp
Length : 456 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding, OB-fold, tRNA/helicase-type

DNA sequence :
ATGGCGAAGGATCTCAACAAGGTGATGATCATCGGGCGTCTCGGTAAAGACCCTGAGATGCGCTATACGCCTGGTGGAAG
CCCTGTAACGACGTTCAGCGTCGCGACAGGACGGCAGTGGAAAGACGGCAGCGGCGAATTGCACGAGGAGACGGAATGGT
TCAATGTAGTGACCTGGAATAAACTGGCCGAGATCTGCCACGAGCACCTGCGCAAATCCAGTCGCGTCTATATCGAAGGG
CGCCTCCAGACTCGCCATTGGGAGGATCAGAACGGGGTGACGCATTACCGCACTGAGGTTGTGGCGAGCGATATGATCAT
GCTCGACAGTCGCGGTCCTCGTGAGTCGTCGCAGTATGGCGATGAGCCGCCGTATCATCACCCCGATCATCGCCCTCAGC
GCGGGCAGCAGTCGAAGGACGATTTTGCCATTGGTGATGAGGATATTCCGTTTTAG

Protein sequence :
MAKDLNKVMIIGRLGKDPEMRYTPGGSPVTTFSVATGRQWKDGSGELHEETEWFNVVTWNKLAEICHEHLRKSSRVYIEG
RLQTRHWEDQNGVTHYRTEVVASDMIMLDSRGPRESSQYGDEPPYHHPDHRPQRGQQSKDDFAIGDEDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 1e-25 45
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-16 42
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-14 42
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 4e-16 42
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 8e-16 41