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Name : RoseRS_3325 (RoseRS_3325) Accession : YP_001277636.1 Strain : Roseiflexus sp. RS-1 Genome accession: NC_009523 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 4174912 - 4175496 bp Length : 585 bp Strand : + Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein DNA sequence : GTGACAGAAGAGAAGAAAAACCAGGAAACGTCGACCGAGTCGGAGATACGTGATGATGACCGCCGATGGTACGTCATTCA CACCTACTCCGGCTACGAGAACAAAGTAAAACAGAATTTGCTCCATCGCATCGAAACGATGGAGATGCGCGATCAGATTT TCAATGTGATCGTGCCAACTGAAGAAGAGATTGAAATCAAAAATGGTCAGCGCCGCACCGTCCAGAAAAAAGTCTTCCCC GGATATGTGCTGGTGCAGATGAAAATGAACGACAACTCATGGTATGTCGTTCGCAACACCCCTGGCGTGACCAGTTTCGT CGGGCATGGGAATAAGCCGACGCCGCTCGAGGAGAGCGAAGTCAAGGCTATCCTGCGCCAGATGGAGCAGGAAGCGCCCA AAGTGAAGGTGAGTTATCAGGTCGGTCAGGCGGTCAAGATTACGGACGGTCCGTTCACCGACTTCGAGGGAGTCGTGGAT GCCATCGACCACGAGCGTGGCCGGGTGCGTGTGCTGGTCTCGTTCTTCGGTCGCGAGGCGCCGGTGGAACTGGACTTCCT CCAGGTGACGCGCCTGGTCGAGTAG Protein sequence : MTEEKKNQETSTESEIRDDDRRWYVIHTYSGYENKVKQNLLHRIETMEMRDQIFNVIVPTEEEIEIKNGQRRTVQKKVFP GYVLVQMKMNDNSWYVVRNTPGVTSFVGHGNKPTPLEESEVKAILRQMEQEAPKVKVSYQVGQAVKITDGPFTDFEGVVD AIDHERGRVRVLVSFFGREAPVELDFLQVTRLVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 3e-37 | 47 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 2e-34 | 47 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 3e-38 | 43 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 3e-38 | 43 |
