Gene Information

Name : RoseRS_3105 (RoseRS_3105)
Accession : YP_001277418.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein, P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 3898453 - 3899706 bp
Length : 1254 bp
Strand : -
Note : PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein

DNA sequence :
ATGCATAGAGCGAGAAGTACGAACGTGAAGCAACAGCATTCTTTTCGTCCCCTGCCGGTTACCGTGCTGTCGGGGTTTCT
TGGCAGCGGCAAGACGACGCTGCTCAACCATGTGCTTGCCAATCGCTCAGGACTGCGGGTGGCGGTCATTGTCAACGATA
TGAGCGAGATCAATATCGATGCGCAACTGGTGCGCAGCGGCGGTGCAGCGCTCAGCCGTACCGATGAGCGTCTGGTCGAG
ATGTCCAACGGATGCATCTGTTGCACGTTGCGTGAGGATCTGCTTGTCGAGGTGGCGCGTCTGGCGCGCGAGGGGCGCTT
CGACTATCTTCTGATCGAGTCAACCGGCATTTCCGAGCCGTTGCCCGTGGCTGAAACCTTCACCTTCGCCGATGAAACGG
GGGTCAGTCTGGCGGAACTGGCGCGCCTGGACACGATGGTGACGGTGGTTGACTCTTTCAATTTCCCACGCGATTTTTTC
TCGACCGATGATCTGCGTGATCGCAATCTGTCCGCTGGCGAGGAGGATGAGCGGTCGGTGGTTGATCTGCTGATCGATCA
GGTGGAGTTCGCCGATGTGCTGGTGTTGAACAAAGTCGATCTGGTCGATCCAGACGCGGTTGATCACCTGGAGGCGCTGC
TGCGCAAACTCAACCCCGATGCGCGGATTGTGCGCACGAGTTTTGGGCGTGTGCCGTTGCACGAGATTCTGAACACCGGA
CGGTTCGATTTCGAACGTGCGGCGCAGGCGCCCGGCTGGCTCAAAGAATTGCGCGGCGAGCACACGCCGGAGACCGAGGA
GTACGGTATTTCGAGTTTTGTCTACCGTGCGCGACGTCCATTCCACCCGCAGCGCTTCTGGGACCTGATCCACGATGCGT
GGCCCGGCGTGTTGCGCTCGAAAGGTCTGATCTGGCTGGCGACGCGAATGCAGGTGAGCGGCATCTGGTCGCAGGCTGGA
AATGCGTGTCGGGTTGAACCTGGCGGGATGTGGTGGGCGGCGTTGCTCGAGGACGAACTGCCCGATGACCCCGATGTAGA
GGCGCAACTGGCGCAGGTGTGGCATAGCCGCTGGGGTGATCGACGGCAGGAACTGGTGCTGATTGGTCAGGATATGGACG
AAGCTGCGCTCCGTGCCCGCCTCGACGCATGTTTGCTGACCGATGCAGAAATGGCGCTGGGACCGGAAGGTTGGGCGCAG
TTTGAGGATCCGTTTGGTGTGTGGACGGTCTGGGAACTGGGATCTGGTGGTTAA

Protein sequence :
MHRARSTNVKQQHSFRPLPVTVLSGFLGSGKTTLLNHVLANRSGLRVAVIVNDMSEINIDAQLVRSGGAALSRTDERLVE
MSNGCICCTLREDLLVEVARLAREGRFDYLLIESTGISEPLPVAETFTFADETGVSLAELARLDTMVTVVDSFNFPRDFF
STDDLRDRNLSAGEEDERSVVDLLIDQVEFADVLVLNKVDLVDPDAVDHLEALLRKLNPDARIVRTSFGRVPLHEILNTG
RFDFERAAQAPGWLKELRGEHTPETEEYGISSFVYRARRPFHPQRFWDLIHDAWPGVLRSKGLIWLATRMQVSGIWSQAG
NACRVEPGGMWWAALLEDELPDDPDVEAQLAQVWHSRWGDRRQELVLIGQDMDEAALRARLDACLLTDAEMALGPEGWAQ
FEDPFGVWTVWELGSGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 7e-84 54
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 2e-84 54