Gene Information

Name : RoseRS_2983 (RoseRS_2983)
Accession : YP_001277297.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 3736602 - 3738026 bp
Length : 1425 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp

DNA sequence : 
ATGGGAATGACTCCAAAAGATGTCCTGGCACTGATCAAAGAGCACGACATCAAGATGGTCGATGTCCGCTTCACCGATAT
GCCAGGCACGTGGCAGCACTTCTCGCTGCCTGCCAGCATGCTCAGCGAGGACGATTTCGTGCATGGTCTGGGGTTTGACG
GATCATCGATCCGCGGCTTCCAGGCAATCAACGAAAGCGATATGCTGGTTGTCCCCGATCCAGACACCGCATTTATCGAT
CCGATGCTGAAGATTCCCACTCTTGCCCTCATTTGCGACATTCGTGATCCGCTGACCGGGGAAAACTACAGCCGCGATCC
GCGCTACATTGCAAAGAAGGCGGAAGAATATCTCCGCAGCACCGGCATCGCCGACACCGCCTATTTCGGTCCCGAAGCGG
AGTTCTTCCTGTTCAGCGATGTGCGTTTCGATCAGGGAAGCCACTTCGGCTACTACTTCCTCGACAGTGATGAAGGCATC
TGGAACAGCGGCGCCGATCGCGGCGGAAAGAACCTCGGATACCGCCCGCGCTACAAGGAAGGGTACTTCCCCTGCCCGCC
GCTCGACACACTTCAGGATGTGCGCTCACAGATCACGCTCAACATGATGGCGGCTGGCATCGAGGTCGAGGTGCATCACC
ACGAAGTCGCCACCGCCGGTCAGTGCGAGATCGACATGCGCTTCGACTCGCTGCTGCGCATGGCGGATAAACTGGTCAAA
TACAAGTACATCGTCAAAAACACCGCACGACAGTTTGGTCTGACGGCGACGTTCATGCCCAAGCCGCTCTTCGGCGATAA
CGGCAGCGGTATGCACTGTCACCAGAGTCTGTGGAAGGAAGGACAGCCGCTGTTCTACGATCCGAAGGGGTATGCGCTGC
TCTCCGATACAGCGCGCTGGTATATCGGCGGGATTCTGACCCATGCACCGGCATTGCTGGCCATCTGTGCGCCGACAACC
AACTCGTACCGCCGTCTGGTGCCCGGCTTCGAGGCGCCGATCAACCTGGTCTACTCGCAGCGCAACCGCTCGGCGGCGAT
TCGCATTCCCACCTATTCGGACTCGCCGAAGGCGCGCCGCATCGAGTTCCGCGCGCCCGATCCGACGTGCAACCCGTATC
TGGCATTCTCGGCGATGTTGATGGCTGGCATCGACGGGATCAAGAACCGGATCGAGCCGCCGCCGCCGCTCGATGTCGAT
ATTTACGAACTGACGGCGGAGGAAAAGGCGCACATCCGTGGAACACCCGGCTCACTGGCAGAGTCGCTTGACGCACTTGA
GGCGGATCATGATTTTCTGCTGGCAGGCGGAGTCTTCACCCCCGACGTGATCGAAACCTATCTGGATTACAAACGGTCGC
GTGAACTGATCCAGGTTGCCATCCGCCCCCACCCCTACGAGTTCTTTATGTACTTCGACGCATAG

Protein sequence : 
MGMTPKDVLALIKEHDIKMVDVRFTDMPGTWQHFSLPASMLSEDDFVHGLGFDGSSIRGFQAINESDMLVVPDPDTAFID
PMLKIPTLALICDIRDPLTGENYSRDPRYIAKKAEEYLRSTGIADTAYFGPEAEFFLFSDVRFDQGSHFGYYFLDSDEGI
WNSGADRGGKNLGYRPRYKEGYFPCPPLDTLQDVRSQITLNMMAAGIEVEVHHHEVATAGQCEIDMRFDSLLRMADKLVK
YKYIVKNTARQFGLTATFMPKPLFGDNGSGMHCHQSLWKEGQPLFYDPKGYALLSDTARWYIGGILTHAPALLAICAPTT
NSYRRLVPGFEAPINLVYSQRNRSAAIRIPTYSDSPKARRIEFRAPDPTCNPYLAFSAMLMAGIDGIKNRIEPPPPLDVD
IYELTAEEKAHIRGTPGSLAESLDALEADHDFLLAGGVFTPDVIETYLDYKRSRELIQVAIRPHPYEFFMYFDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-90 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RoseRS_2983 YP_001277297.1 glutamine synthetase, type I VFG1399 Protein 2e-131 60