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Name : RoseRS_0281 (RoseRS_0281) Accession : YP_001274663.1 Strain : Roseiflexus sp. RS-1 Genome accession: NC_009523 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 356471 - 359557 bp Length : 3087 bp Strand : + Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like DNA sequence : ATGATGAGTGAGCGTCACTTCTGTGAATCCACCATCGAATCCGCTGCCCTCGCCCGGCTAGAAGCTTCTGGCTGGCAGGT TGCGCACGGTCCCGACCTCGCCCCGGGCACGCGGACAGCTGAGCGGCGCGACTATGGCGAAGTGGTGCTGACCGGTCGGC TCCGCGACGCGCTTGCCCGCCTCAACCCCGACCTGCCTGTCGAGGCGCTGGACGACGCCTTCCGCCAGCTCACGCAGCCC CAGGGCGCCGATCTGATCCAGCGCAACCGCGCGCAGCACCGCCTGCTGGTGGACGGGGTGACGGTCGAGCACCGCAATGC CGGGGGCGCGATCTGCGGGGCGCAAGCCAGGGTGATTGACTTCGACGACCCGGCGAACAACGACTGGCTCGCAGTCAATC AGTTCACGGTGGTGGAAAACAAGCACACGCGCCGTCCAGACATAGTGCTGTTCGTCAACGGCCTGCCGCTGGCAGTGCTG GAGCTGAAGAACGCCGCCGATGAAAAGGCGACGATCTGGACGGCCTGGCAACAACTCCAGACCTATCAGGCTCAGATCCC CTCGTTGCTGGCTACCAACGCCGCACTCGTCATCTCCGACGGCCTGACAGCGCGCGTCGGCGCGCTCGGTGCGGGGCGCG AGTGGTTCAAGCCGTGGCGCACCATTCACGGCGAGGCGCTGGCGGATCCCCATATGCCCGAATTGCAGGTGGTGATCGAG GGACTCTTCGCGCCGCGCCGTTTCCTCGACTTCGTCCGTGACTTCATCGTCTTCGAGGACGATGGCAGCGGACGGCTGAT CAAGAAGATGGCCGGGTACCACCAGTTCCATGCGGTGCAGGTGGCAGTCGCCGAAACGCTGCGCGCCGCCGAACTGGCGC GCACTGATCAGGTGGCGGAGGAGCGTGGGCGCTATGAGGCGGGACGCAGGCCCGGGGGCAAGCCTGGAGATCGGCGTATC GGCGTGGTGTGGCACACGCAGGGTTCGGGGAAGAGCCTGACCATGGTGTTCTATGCTGGCCGTATCGTCCGCGAGCCGGC AATGGAGAACCCGACGATTGTCGTGCTCACCGACCGCAACGACCTCGACGACCAGCTCTTCGCCACCTTCGCGCGCTGCC GCGACCTGCTGCGCCAGCCGCCGGTGCAGGCCGAGAGTCGCGTCCACCTGCGCCAGATTCTGTCTGTAGCAGCGGGCGGC GTGGTGTTCACCACGATTCATAAGTTCTTCCCGGAAGAGAAAGGCGACCGCCACCCGACGCTCTCCGAGCGGCGTAATAT CGTGGTGATCGCCGATGAGGCGCACCGCAGCCAGTACGACTTCATTGACGGCTTCGCGCGCCACATGCGCGACGCCCTGC CGAACGCTTCGTTCATCGGCTTTACCGGCACGCCGATTGAAAAGACCGACGCCAACACCCGCGCGGTCTTCGGCGATTAC ATCAGCATTTACGACATCCAGCGCGCCGTCGAGGATGGCGTGACCGTGCCGATCTACTACGAGAGTCGCCTGGCGAAGCT TGCCCTCGACGAGACGGAGCGACCGAAGATCGACCCGGACTTCGAGGAGGTCACCGAAGGCGAGGAGGTCGAGCGCAAGG AGAGGCTCAAGAGTAAGTGGGCGCAGTTCGAGGCCATCGTCGGCGCGGAGAAACGGCTCAGGCTGGTGGCGCGCGACATC GTCGAGCATTTCGAGAAGCGGCTGGAGGCACTGGACGGAAAGGCGATGATCGTCTGTATGAGCCGACGTATCTGCGTCGA GCTGTATCGGGAGATTGCCCAATTGCGGCCGCAGTGGGCAGCCGATGACGACGAGCGGGGCGCGATGAAGGTGGTGATGA CCGGCTCGGCCTCCGACCCGCTCGACTGGCAACCTCACATCCGCAACAAACCGCGACGCGAGGCGCTTGCCAACCGTTTT CGCAATCCAGGCGATCCGTTCAGGCTCGTGATTGTGCGCGACATGTGGCTGACCGGCTTTGACGCGCCCAGCCTGCACAC GATGTACATCGACAAGCCGATGCGCGGCCACGGTCTGATGCAGGCCATTGCGCGCGTCAACCGCGTCTTCCATGACAAGC CCGGCGGCCTGGTGGTGGACTACCTGGGGCTGGCGCACGAACTCAAGGCTGCGCTCGCCACCTATACCGAGAGCGGCGGT ACCGGCCAGACGACCGTCGATCAACAAGAGGCCATAGCACTGATGCAGGAAAAGTACGAGATCTGCTGTGGCATCCTGCA CGGCTTCGACTGGTCGGATTGGATAAGCGGCGACCCGCAAGCGCGTATCGGTCTGTTGCCCGCAGCGCAGGAGCAGGTGC TGTCGCGCGTGAACGGCAAGGAGCGGTTCATCCAGGCGGTACGCGACCTGACCAGGGCGTTCGCGCTCGCGACGCTGCAC GAGGAGGCAATCAAGATCCGCGACGATGTCGCCTTTTTCCAGGCGGTGCAGGCAGCGCTGACCAAACGCGCACCCGGCGA GATGCGTCCGGAGGATGAGCTGGATCACGCCGTCCGCCAGATCATCGCTCGCGCAGTCGCTCCTGCAGGCGTTATAGATA TCTTCACGGCAGCCGGGCTTCAGAAGCCCGACATCTCGATTCTCTCCAACGAATTCCTGGCCGAGGTGCGCGGCATGCCA CAGCGAAACCTGGCGGTAGAAACGCTACAGAAACTGCTCAAGGGGGAGATCAGTACGCGCCAGCGAAAAAATGTCGTCCA GGCGCGCTCCTTCGCCGAGATGCTGGAGCAAACCATCCGCCGCTACCAGAACCGCGCCATCGAGGCGGCGCAGGTGATCG AGGAGCTTATCTCCCTGGCCAGGGACATGCGCGAGGCCGATGCGCGTGGCAAGAAGCTGGGACTCTCCGAGGAGGAACTG GCTTTCTACGACGCTTTGGAGACCAACGATAGCGCGGTGAAGGTGCTGGGAGACGAGACATTGAGGACGATCGCGCGCGA ATTGGTCAAGACCGTGCGGAGCAACGTCACTATCGACTGGACAATCCGTGAGAACGTCCGGGCGCAACTGCGCGTGTTGG TGAAGCGCATTCTGCGCAAGTACGGCTACCCCCCCGACAGGCAGTAG Protein sequence : MMSERHFCESTIESAALARLEASGWQVAHGPDLAPGTRTAERRDYGEVVLTGRLRDALARLNPDLPVEALDDAFRQLTQP QGADLIQRNRAQHRLLVDGVTVEHRNAGGAICGAQARVIDFDDPANNDWLAVNQFTVVENKHTRRPDIVLFVNGLPLAVL ELKNAADEKATIWTAWQQLQTYQAQIPSLLATNAALVISDGLTARVGALGAGREWFKPWRTIHGEALADPHMPELQVVIE GLFAPRRFLDFVRDFIVFEDDGSGRLIKKMAGYHQFHAVQVAVAETLRAAELARTDQVAEERGRYEAGRRPGGKPGDRRI GVVWHTQGSGKSLTMVFYAGRIVREPAMENPTIVVLTDRNDLDDQLFATFARCRDLLRQPPVQAESRVHLRQILSVAAGG VVFTTIHKFFPEEKGDRHPTLSERRNIVVIADEAHRSQYDFIDGFARHMRDALPNASFIGFTGTPIEKTDANTRAVFGDY ISIYDIQRAVEDGVTVPIYYESRLAKLALDETERPKIDPDFEEVTEGEEVERKERLKSKWAQFEAIVGAEKRLRLVARDI VEHFEKRLEALDGKAMIVCMSRRICVELYREIAQLRPQWAADDDERGAMKVVMTGSASDPLDWQPHIRNKPRREALANRF RNPGDPFRLVIVRDMWLTGFDAPSLHTMYIDKPMRGHGLMQAIARVNRVFHDKPGGLVVDYLGLAHELKAALATYTESGG TGQTTVDQQEAIALMQEKYEICCGILHGFDWSDWISGDPQARIGLLPAAQEQVLSRVNGKERFIQAVRDLTRAFALATLH EEAIKIRDDVAFFQAVQAALTKRAPGEMRPEDELDHAVRQIIARAVAPAGVIDIFTAAGLQKPDISILSNEFLAEVRGMP QRNLAVETLQKLLKGEISTRQRKNVVQARSFAEMLEQTIRRYQNRAIEAAQVIEELISLARDMREADARGKKLGLSEEEL AFYDALETNDSAVKVLGDETLRTIARELVKTVRSNVTIDWTIRENVRAQLRVLVKRILRKYGYPPDRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 45 |
