Gene Information

Name : RoseRS_0265 (RoseRS_0265)
Accession : YP_001274650.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 333806 - 335344 bp
Length : 1539 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase

DNA sequence :
ATGGACGATCACATCAACGAGGATCTCCCATGCTATGGGTTGTATATCGATGGATCCTGGGTCGATGCCGAAGGGGGCAC
GATGCCGGTCAACGAGCCGGCGCTGGGGCGACCGATGGCGCGGGTCGCGCGCGGCTCCGCCGCCGATGTTGACCGTGCGG
TCGCCGCTGCGCGCGAAGCCTTCGACCGTGGACCGTGGCCCCACACGCCGGGACACGAACGCGCCCGCGTCCTGAACGCA
ATCGCCGACCTGATCGAAGAACACACCGCCGAATTCGCAGAACTCGAAACGCGCAACCTGGGTGCGCCGCTGCGCAAGAC
AACATTCGTCGATATTCCCTGGTCAGTCGAGCATCTGCGCGTCTTTGCCGAACTGGCGACCATCCACCCCTATGAGCCGC
TGCCATGGACCGATGTCCCTTCTGTGAGCTGGAACTTTGTCTGGCGCGAGCCGATCGGTGTGTGCGGTCAGATTGTTCCG
TGGAACTACCCGCTCCTGATGACGATCTGGAAAATCGCTCCGGCGCTGGCTGCTGGAAATACGATCGTGCTCAAACCTGC
GTCCTACACCCCGCTGACGGCGCTGAGGCTGACGCAGTTGATCCATGAGGCAGGACTGTTGCCGCGCGGTGTGTTGAATG
TCGTAACCGGTCCCGGAGCGGAGGTCGGCGATGCGCTGGCGCGTCACCCTGGTGTAGACAAAGTATCGTTTACCGGATCG
ACTGAAACCGGACGACATATCATGCGCCTGGCGAGCGACACGATCAAACGTCTGACGCTCGAACTCGGCGGCAAGTCACC
CAGTCTGGTGATGCCGGACGCCGATCTCGAACTGGCGACCGATGGCGTTCTGTTTGGCGTCTTCTTCAATGGCGGGCAGA
GTTGCGAAGCCGGAACCCGCTGCCTGGTGCCGGAAAGCCTGCACGATGAGTTTCTTGAACGCCTGGTGACGCGCGCCCGC
TCATTGCGGATCGGTGATCCCCTCGACCTGGAAACCGACCTGGGTCCGCTCGTCTCCGAAGCGCAGTGTCGGATCGTCGA
AGAGTATATCGAGGTCGGCAAGAACGAGGGCGCCCGACTGGTGACGGGCGGACGCAGAGTGCGCGTACCGGGATTCGAGC
GCGGTCCTTTCGTTGAACCGACGATCTTCACCAATGTGCTGAACGGAACGCGCCTGGCGCAGGAAGAGATCTTTGGTCCG
GTGCTTTCGGTCATTCCGTATCGCACCGTCACGGAAGCCATCGAACTGGCGAATGCCAGTCGCTACGGTCTTGGCGCTGC
CGTCTGGTCACGCGATTTGCAGGGCGCTATCGAGGTGGCCAAACGCATCCGCACCGGCACCGTCTGGATCAACGATCACC
ATATTATTCTGCCACGTGCGCCATTCGGCGGCTACAAGCAGAGCGGCATCGGGCGCGAGCATGGCATTTACGGGTTGATG
GCGTACACCGAATTGAAGCATATCCACGTCGATCTGATGCAAAAACGCACCGGTCGCGTCTGGTGGGATGTCCTTATTCC
TCAGAGCGAAAGCGAGTAA

Protein sequence :
MDDHINEDLPCYGLYIDGSWVDAEGGTMPVNEPALGRPMARVARGSAADVDRAVAAAREAFDRGPWPHTPGHERARVLNA
IADLIEEHTAEFAELETRNLGAPLRKTTFVDIPWSVEHLRVFAELATIHPYEPLPWTDVPSVSWNFVWREPIGVCGQIVP
WNYPLLMTIWKIAPALAAGNTIVLKPASYTPLTALRLTQLIHEAGLLPRGVLNVVTGPGAEVGDALARHPGVDKVSFTGS
TETGRHIMRLASDTIKRLTLELGGKSPSLVMPDADLELATDGVLFGVFFNGGQSCEAGTRCLVPESLHDEFLERLVTRAR
SLRIGDPLDLETDLGPLVSEAQCRIVEEYIEVGKNEGARLVTGGRRVRVPGFERGPFVEPTIFTNVLNGTRLAQEEIFGP
VLSVIPYRTVTEAIELANASRYGLGAAVWSRDLQGAIEVAKRIRTGTVWINDHHIILPRAPFGGYKQSGIGREHGIYGLM
AYTELKHIHVDLMQKRTGRVWWDVLIPQSESE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-67 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-75 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RoseRS_0265 YP_001274650.1 aldehyde dehydrogenase VFG0082 Protein 1e-75 43