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Name : RoseRS_2450 (RoseRS_2450) Accession : YP_001276777.1 Strain : Roseiflexus sp. RS-1 Genome accession: NC_009523 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 3026545 - 3028761 bp Length : 2217 bp Strand : + Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 DNA sequence : ATGCAGACACGCAACTACATCTTCGCCATTCACGGCATCGACTGCGCGCATTGCGCGAACACCATCGAGGTGAGCGTCGC TCGTCTCGATGGCGTCGAGGCGTGCGAACTCAACGCGACGACCGGTCGGCTCCGTGTGCGCGGCGCCGTCGAACCTGATG CAATTATTACGTATGTGCGTTCGCTGGGGTATGAGGCGACGCTGCTGGAAAACGACGGTGTAACGCCGACGACCCCCGAC GCATCGGTGTCGTTTGTTGAGTTCATGTGGCAACGCCTTGAAACGCGCCTGGCGCTGATCGGCGCAATAATGATCGTTCC AGGCGTTGTCCTGCATGAACTGCTCGGATGGCGCGCCTTCTGGATCGACGCCCTGGCATTTGCTGCGCTGATTGCCGCCG GTCTGCCGATCGCGCGCAGCGCCTGGCGTTCACTCGTCCGCAGTCGCACGATCTCGATCAATGCGCTGATGACCATTGCC GCAATTGGGGCGGTGATCATTGGAGCGCATGTCGAAGCTGCCCTGGTTATGGTATTATTTGCCATTGGCGAGGCGATCGA AGGGTTTACCGCTGCGCGCGCACGCGATGCCATTCGTTCGCTGATGACGCTTGTTCCTGAAACTGCTCTGCGCCTCCGCG ACGGATATGAAACAAGGACGCCGGTCGCCGAACTGAAGGTTGGCGACGTCATCGTTGTGCGCCCTGGCGAGCGTGTGCCG ATGGATGGCGTCGTGCGCAGCGGCGCGACGCATATCAACCAGGCGCCGATCACCGGCGAGAGTGTGCCGGTCGTCAAGAC GCCGGGAGCGGAAGTGTATGCCGGGAGCATCAACGGCGAAGGCGTGATCGAGGTGATTGTCACGCATCTGGCAAGCGACA ACACGATCAGTCGCATGATCCGCCTGGTGCAGGAGGCGCAGGATCGCCGTGCGCCCGTGCAGCGCCTGATTGATCGCTTT GCAGGATGGTATACGCCGGCAGTGGTTGCCATTGCTGCGCTGATCGCCGTCATCCCGCCGCTGCTGTTCGGGCAACCGTT CTGGAACCCGTCGCCGGACGAATTCGGCTGGTTCTACCGTAGTCTGGCGCTTCTGGTCGTCGCCTGTCCCTGCGCGCTCG TCATCAGCACGCCGGTGAGCGTGGTCAGTGCGTTGAGCGCTGCAGCGCGCGCTGGCGTGCTGATCAAAGGCGGTGCGGCG CTGGAGGCGCTTGGCAAGGTGCGCGCTGTCGCATTCGATAAAACCGGCACCCTGACCACGGGCAGACCGGTGCTCGTTGC AGTACGCTCGGTGGAATGCCGCGAGCCGGAACAGAACGAGGATGCACGTTGCGACGCATGCACAACGCTGCTCGAACTTG CCTGCGCCGTCGAGCAACGCTCCGAACATCCCCTGGCGCACGCGATTGTCGATGCCGCCCGCGTGCGGGGAGTCATGCAG AACGCGCCACGCGCCACATCCGTCACGGCGCTGCCGGGTCACGGGATTGTGGGGGATGTGAATGGGCGCACGGTCCTCAT CGGCAGCCATCGTTACTTCGATGAAACAGCGCCTCACCCGCTCGCCTTCTGTGATCGCGCGGAACGGGACGCTGGCGCCG GTCGCACGCCGCTGATGGTCAGCATCGATGGGACGTTCGCCGGTATGCTGAGCGTCGCCGACGCCATTCGCCCTGAAGCC CGCGAAGCGATTGCGCGCCTGAGACGAGCAGGGATTCAACACGCCGTCATGCTCACCGGCGACCGCCGTGAAACGGCGCA GGCCATCGCCGCCGACGCTGGCATCGATGATGTGCGTGCTGAAGTGCTCCCCGAATACAAAGCGCAGATGGTCGAAAACC TCCGCGCCACCTACGGCGCTGTGGCAATGGTCGGCGACGGCATCAACGATACTCCCGCCCTGGCATCGGCAACTGTCGGC ATTGCCATCGGTGCGGCGCACGGCGGAACGAATCAGGCAATGGAAACCGCTGATGTCACTCTGATGAGCGATGACCTGCG CCGCCTGCCATTCGTGTTCGAGCTGGCGCGCGCCACACGCCGCACAATTATGGTCAATGTCGCCTTTAGCATTGCCGTCA AGGCGGTGTTTCTGGTGATTGTTGCAGCAGGCTGGAGTACCATGTGGATGGCGGTGTTCGCCGATATGGGGACATCGCTG CTGGTAACGTTGAACGGTCTGCGGTTGCTGGGGATGCGCCACCAGGGAGAGGCGTGA Protein sequence : MQTRNYIFAIHGIDCAHCANTIEVSVARLDGVEACELNATTGRLRVRGAVEPDAIITYVRSLGYEATLLENDGVTPTTPD ASVSFVEFMWQRLETRLALIGAIMIVPGVVLHELLGWRAFWIDALAFAALIAAGLPIARSAWRSLVRSRTISINALMTIA AIGAVIIGAHVEAALVMVLFAIGEAIEGFTAARARDAIRSLMTLVPETALRLRDGYETRTPVAELKVGDVIVVRPGERVP MDGVVRSGATHINQAPITGESVPVVKTPGAEVYAGSINGEGVIEVIVTHLASDNTISRMIRLVQEAQDRRAPVQRLIDRF AGWYTPAVVAIAALIAVIPPLLFGQPFWNPSPDEFGWFYRSLALLVVACPCALVISTPVSVVSALSAAARAGVLIKGGAA LEALGKVRAVAFDKTGTLTTGRPVLVAVRSVECREPEQNEDARCDACTTLLELACAVEQRSEHPLAHAIVDAARVRGVMQ NAPRATSVTALPGHGIVGDVNGRTVLIGSHRYFDETAPHPLAFCDRAERDAGAGRTPLMVSIDGTFAGMLSVADAIRPEA REAIARLRRAGIQHAVMLTGDRRETAQAIAADAGIDDVRAEVLPEYKAQMVENLRATYGAVAMVGDGINDTPALASATVG IAIGAAHGGTNQAMETADVTLMSDDLRRLPFVFELARATRRTIMVNVAFSIAVKAVFLVIVAAGWSTMWMAVFADMGTSL LVTLNGLRLLGMRHQGEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 2e-87 | 41 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 2e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RoseRS_2450 | YP_001276777.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 2e-63 | 46 |
| RoseRS_2450 | YP_001276777.1 | heavy metal translocating P-type ATPase | BAC0092 | Protein | 5e-61 | 42 |
