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Name : RoseRS_2395 (RoseRS_2395) Accession : YP_001276722.1 Strain : Roseiflexus sp. RS-1 Genome accession: NC_009523 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 2963263 - 2964204 bp Length : 942 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal d DNA sequence : ATGGCTCATGTATTGGTGACCGGCGGCGCCGGGTTTATCGGATCGCACCTGGTTGAGGCGCTGCTCCGCCGCGGCGAGAG GGTGCGTGTGTTCGATAATTTTTCGACCGGGCGGCACGAAAATGTGAAGCATCTGCATGACGACATAGAACTTATCGAGG GTGACCTGCGCGATTTCGATGCTGTCCGGCGCGCCGTCGCCGGCGTCGAAGTCGTCTTTCATCAGGCGGCGCTGGCATCA GTGCAACGTTCAGTTGACGACCCGATGACGACCAATGCAGTCAACGTGACCGGGACGCTCCACGTGCTGATGGCGGCGCG CGATGCCGGTGTGCGGCGGGTGGTCTTCGCTTCGTCATCGTCGGTCTACGGGGATACGCCGACGCTGCCCAAGGTCGAAA CGCAGGCGCCGCAACCGCTTTCTCCCTATGCAGTGTCGAAACTGGCAGGTGAACAGTACTGCATGGCGTTCAGCGTCGTG TATGGTCTGCCATCCATTGCGCTGCGCTACTTCAACGTCTTTGGTCCGCGACAGGACCCGCACTCCGAATATGCCGCCGT TATCCCGCGTTTCATTGATCGCATGGTACGCGGGTTGCCGCCGATCATCTATGGCGATGGATTGCAGTCGCGCGATTTTA CCTATATCGAGAACGTGGTCGATGCAAACCTGGCAGCGGCAGATGCACCCGCCAGTTGTTCAACAGTGTTCAACGTCGGC GCTGGCGAACGCACCTCGCTGCTCGACCTTGCAGCGCAGATCAACCATGTGCTGGGGAGTCGTCTGACGCCGGATCATCA TCCGCCGCGAGCGGGTGATGTGCGCCATTCGCTGGCAAGCATCGAGGCGATCAGTCAAACCCTGGGCTATGCGCCGCGCA TCACGCTGGCTGAAGGACTGGCGCGCACGATTGAGTGGTTCCGTTCCAGGTATCAAGGATAA Protein sequence : MAHVLVTGGAGFIGSHLVEALLRRGERVRVFDNFSTGRHENVKHLHDDIELIEGDLRDFDAVRRAVAGVEVVFHQAALAS VQRSVDDPMTTNAVNVTGTLHVLMAARDAGVRRVVFASSSSVYGDTPTLPKVETQAPQPLSPYAVSKLAGEQYCMAFSVV YGLPSIALRYFNVFGPRQDPHSEYAAVIPRFIDRMVRGLPPIIYGDGLQSRDFTYIENVVDANLAAADAPASCSTVFNVG AGERTSLLDLAAQINHVLGSRLTPDHHPPRAGDVRHSLASIEAISQTLGYAPRITLAEGLARTIEWFRSRYQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 2e-46 | 46 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 2e-46 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RoseRS_2395 | YP_001276722.1 | NAD-dependent epimerase/dehydratase | VFG0430 | Protein | 8e-47 | 46 |
