Gene Information

Name : RoseRS_0180 (RoseRS_0180)
Accession : YP_001274566.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 227624 - 228319 bp
Length : 696 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATGACAACTCCTTCTACCATACCCGCAGTGCGTGTCACCAATGTCACACGCGCATACACGGTCAACAATGAACAGGT
GCTTGCCCTGCGCGGCGTCAGCCTGACGGTTGAAGAGGGCGCATTTATTGCGCTCATGGGGCGATCCGGTTCGGGCAAAA
CCACCCTGCTCAACATGATCGGCGGTCTCGACCAACCGAGCAGCGGGGAAGTCGCGCTCTACGGTCAGGTATTGAACGGG
ATGAACCAGGATCAGTTGACCCTTTTGCGCCGTGAGAAGATCGGGTTCATCTTTCAGTCATTCGCGCTCCTTCCCATTCT
CTCGGCGTGGGAGAATGTCGAGATGCCGTTGCGCATCGCCGGGGTGCGTTCCAGGCGTGAGCGGCGGCAGCGCGCCGAGG
CCGCCCTGGCGCTCGTGGGGCTTGAACGCTGGGCGACGCACCGCCCTGCCGAAATGTCCGGCGGGCAACAGCAGCGCGTC
GCAATCGCCCGCGCCCTCGTCTCACGTCCGCGTCTCCTGCTGGCGGATGAACCGACCGGCGAACTCGACTCGACCACCGG
GCGGAATCTGCTCACCCTGCTGCGCACCATCGTCCGCACCGAAGGCGTGACCCTGATCATGGCGACCCACGACCGGACGA
TCTTCGATTTCGCCGACGTTGTGTATCAGTTGCGCGATGGGCAGCTTGAACCTTGA

Protein sequence : 
MMTTPSTIPAVRVTNVTRAYTVNNEQVLALRGVSLTVEEGAFIALMGRSGSGKTTLLNMIGGLDQPSSGEVALYGQVLNG
MNQDQLTLLRREKIGFIFQSFALLPILSAWENVEMPLRIAGVRSRRERRQRAEAALALVGLERWATHRPAEMSGGQQQRV
AIARALVSRPRLLLADEPTGELDSTTGRNLLTLLRTIVRTEGVTLIMATHDRTIFDFADVVYQLRDGQLEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RoseRS_0180 YP_001274566.1 ABC transporter-like protein NC_012469.1.7686878. Protein 7e-36 48
RoseRS_0180 YP_001274566.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-32 48
RoseRS_0180 YP_001274566.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-33 43
RoseRS_0180 YP_001274566.1 ABC transporter-like protein CP001581.1.gene598.p Protein 4e-35 41