Gene Information

Name : RoseRS_1428 (RoseRS_1428)
Accession : YP_001275776.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1738716 - 1740152 bp
Length : 1437 bp
Strand : -
Note : PFAM: pyruvate kinase

DNA sequence : 
ATGAAGCAGGAGCATATGCGCCGTACAAAAATAGTAGCGACGATTGGACCGGTCAGCAGCACCCCAGAGGTGATCGAACG
CCTGCTCAACGCTGGCATGGATGTGGCGCGGCTTAATTTTTCGCATGGGACCCAGGATGAGCATGCTCGACGGATCGAGA
TGTTGCGCGAGGTTGCTGTGCGCAAAGGACGACCGCTGGCACTGCTGCAAGACCTGCAAGGACCGAAGATTCGCACCGGT
TCGCTGGTTGATCGCACGCCGGTCATGCTTCAGCCCGGCGCCCGTTTCACCATCACAACGCGCAATGTTGCGGGAACTGC
GAGTCTCGTGAGCACAACCTATGCTGCCCTTCCCCGCGATGTTCGTCCCGGCGACCGCATCCTGATCTCCGATGGCTTGA
TCGAAGCACGGGTCGTGCGCGTTTCTGGCGATGACGTGGAAACCGAGATCGTCGTCGGCGGCGAACTGCGTGAACATCAG
GGCATAAACCTCCCCGGCGTCGCGGTCAGTGCGCCAGCGCTGACCGACAAAGATCGCAGTGATCTGCTCTTCGGTCTGGC
GCAGGGAGTGGACTATGTAGCGCTCTCATTTGTGAGGCGCGCGTCGGATCTGGTGGAAATCAAGGCGCAGATCGCTGCGG
CTGGCGCATCGACGCCGGTCATTGCAAAGATCGAGAAGCCGGAAGCGCTGCACGAATTCGAAGCCATTCTGGAAGCGGCG
GACGGCATCATGGTTGCGCGCGGCGATCTGGGGGTCGAAATGCCACCCGAACAGGTGCCTATCGTCCAGAAACAGGTGAT
CGAGGCGACGAACATGGCGGGCAAGCCGGTCATTACAGCCACGCAAATGCTCGACTCGATGATTCGCAACCCGCGCCCAA
CACGCGCCGAGGCGAGCGATGTCGCCAATGCGATCATCGATGGCACAGATGCGGTGATGCTCAGCGGCGAAACCGCCACC
GGCGCGTATCCGGTCGAAGCGGTGCAGATGATGGGGCGCATCGCTGAAGTGACCGAAGCCAGCGGACGGCGCGGCGACCA
CAGTCATGAGATCATCTGGCGTTTCCATGAGCAGCCGACGGTCGCAGCGGCGATCAGTTCCGCTGTGCATGCGATCGTGC
AGGTGCTGCCGGTGACTGCGATTGTCGCATTCACGATGAGCGGCAGCACCGCCCGTCTGGTGGCGCGGCAGCGCCCAAAG
ACGCCGATCTTTGCGCTGACGCCATCTGAAGCGGTCTATCGGCGACTGAACCTGGTATGGGGCGTTACGCCGCTCCTGTG
TCCCTACGTTGATCGACTGGACGATCTGGAGGATGCGGTACGCAATGTGCTGATCGGTCAGGGGTACGCCCGTCCTGGCG
ATCAGATCGTGATGACCGGCGGGCATCCGATTGCCACGCGCGGCGCAACGAATTTCGTGAAGGTGATGCGGTTGTAG

Protein sequence : 
MKQEHMRRTKIVATIGPVSSTPEVIERLLNAGMDVARLNFSHGTQDEHARRIEMLREVAVRKGRPLALLQDLQGPKIRTG
SLVDRTPVMLQPGARFTITTRNVAGTASLVSTTYAALPRDVRPGDRILISDGLIEARVVRVSGDDVETEIVVGGELREHQ
GINLPGVAVSAPALTDKDRSDLLFGLAQGVDYVALSFVRRASDLVEIKAQIAAAGASTPVIAKIEKPEALHEFEAILEAA
DGIMVARGDLGVEMPPEQVPIVQKQVIEATNMAGKPVITATQMLDSMIRNPRPTRAEASDVANAIIDGTDAVMLSGETAT
GAYPVEAVQMMGRIAEVTEASGRRGDHSHEIIWRFHEQPTVAAAISSAVHAIVQVLPVTAIVAFTMSGSTARLVARQRPK
TPIFALTPSEAVYRRLNLVWGVTPLLCPYVDRLDDLEDAVRNVLIGQGYARPGDQIVMTGGHPIATRGATNFVKVMRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-87 46
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-87 46
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-87 46
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-87 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RoseRS_1428 YP_001275776.1 pyruvate kinase VFG0479 Protein 5e-88 46