Gene Information

Name : RoseRS_1362 (RoseRS_1362)
Accession : YP_001275712.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1671884 - 1672657 bp
Length : 774 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR

DNA sequence :
ATGAGTGACATCCTTGCAGGCAAAGTCGCGCTGATCACCGGCGCCGCCAGCGGCATCGGGCGCGCCACGGCGCTGACGCT
GGCGCGTGAAGGCGCTGCGGTCGTCGTGGCCGACATCGATGCACCACGCGGTGCGGAAACCGTTGCGACAATCGGCGCTG
CCGGCGGGCGGGCGCACTTCGTGCAGGCGGATGTCATCCGTGATGCAGAACGGATGGTCGAAGCCGCAATGCAGGAATTC
GGGCGACTCGACATCCTGGTGAACAACGCCGGTATCTTCTACACCGTCGATCTGCTCGACGTGACCTTCGATGAATGGGT
GCGCGCTGTTGATGTCATGTACTTCGGCACATTTCGTTGCAGTCAGGCGGCAGCGCGGCAGATGGTTCATCAGGGAGCAG
GCGGGCGGATCGTCAACATCTCCTCGATCAACGCCTTTCTCGGTATGCCACAGTCCAGCCACTACAACTCGGCAAAAGGC
GCGATTGATCAGCTAACGCGCTGCCTGGCGGTCGAACTTGCGCCGCACGGCATTCTGGTCAATGGTGTAGCGCCGGGGTT
CGTCGAAACGCCTATGGCAATCGTCAATGGCATCAACGAACACGAAACGCCAGAGTTTCAGGAGTTCTATGTGCGTCGGC
GGCGCATCCCGCTGGCGCGCCCCGCACTCCCCGCAGAGATCGCCGAAGCAGTGGCGTTCCTTGTTTCACCACGCTGCACC
TACATCACCGGGCACACACTGGTTGTCGACGGCGGGTTGTCGATCACGTTCTGA

Protein sequence :
MSDILAGKVALITGAASGIGRATALTLAREGAAVVVADIDAPRGAETVATIGAAGGRAHFVQADVIRDAERMVEAAMQEF
GRLDILVNNAGIFYTVDLLDVTFDEWVRAVDVMYFGTFRCSQAAARQMVHQGAGGRIVNISSINAFLGMPQSSHYNSAKG
AIDQLTRCLAVELAPHGILVNGVAPGFVETPMAIVNGINEHETPEFQEFYVRRRRIPLARPALPAEIAEAVAFLVSPRCT
YITGHTLVVDGGLSITF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 2e-21 42
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-17 41