|
Name : Msm_0774 (Msm_0774) Accession : YP_001273347.1 Strain : Methanobrevibacter smithii ATCC 35061 Genome accession: NC_009515 Putative virulence/resistance : Resistance Product : multidrug ABC transporter, ATPase component Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 733887 - 735677 bp Length : 1791 bp Strand : - Note : COG1132 DNA sequence : ATGCCAGAAACTCAAAATAAAAATAAATTTATTAGATTATTGAATTACTCGGGTAATTATAAATATTTGACAATTGTAGG TATGTTTTTATCAGCTTTAAGTGCAATATGTTTATTGGTTCCATTTGTTTATATATGGGATGTGGTCAATGCCCTATTGG CGGTTGCCCCTGATTTTACAAAAGCCCAAAACTTGGATGTTTATGCGATAAATGCGTTTACATTTGCAGTACTGGGAATA ATTTTAAACTTTTTTGGTCTGATGGGTACACATTTGTCCGCATTTAAAAATGAGAAAAACATGAAAGATGCAGCTATAAA GCATTTACTTAAGTTGCCTTTAGGTTATTTTTCAAACCATACAAGTGGGGGTCTTAGAAAGATAATTGATTACAGCACTG CAAAAACTGAAATATTCCTCGCTCATCAATTGTTTGATTTGACAGGAGCTATTGTGACTCCAATAATATTTTTAATTTTG TTATTTAGTTTTGATTGGCGTTTAGGGTTAATCTGTCTGATTCCAATCATATTATGTTTTGTATTTATGTATCCTATGTT TTCAAAAGAATCCAGAAATAGCATGGAGAAATATGAGAAATATTTGGAGGAAATGAATGGAGAAGCAGTAGAATATGTAA GAGGAATTCCAGTTACAAAAGCATTTCAACAAAGTATTTACTCATTTAAAAACTTTATCAATGCCATCAAAAACTACGGA AAATTTTCGGCTGAATATTCTATGTCAACTCACATTCCTATGACTGCATTTACAGTATCCATCAACGGATTTTTTGCATT GTTGATTCCAGCAGGAATACTTCTTGCAGGATCAGTTGTAGATGTAAAATTCTTTGCAAACTTCATGTTTTACATTATTT TCACACCAATCTGTGCTGTAATGATGATGAAAATAATGACAGTTTCACAAGATTGGATGTTGGCAAGTTGTGCTTTAGAC AGTATAGAAGCTATTCTAAATGAAAACCCTTTAGTTGACCCAATCAATCCTCAAAAACCTAAAAATCATTCAATAGAGTT TGAAGGAGTTTATTTTGATTATGAAAATGCCGATGGTGATGAACATATTTTAAATGATGTGAATTTAAAAATTAATGAAA ATGAAACTGTTGCATTAGTTGGCCCTTCTGGAGGGGGCAAAACCACAATTGCATCATTGATTCCAAGATTTTGGGATGTT AATCAGGGTTCAATTAAAGTTGGGGATGTTGATGTAAGAGATATTTCAACAAAGGAATTGATGAAAAATATTTCTTTCGT ATTCCAGAATACGACATTATTTAAAGATTCAATTTACAATAATGTTGCAATTGGTCGTAAGGGTGCATCAAGAGATGATG TTAAAAAAGCATTGAGTTTAACCCAATGTGACGATATTATTGATGAGCTTCCGGACGGAATAAATACTGTAATAGGAAGT GAAGGAACCTATCTTTCAGGAGGTCAACAGCAAAGGATTGCACTTGCAAGAGCGGTTCTTAAGGATGCTCCAATAATTAT TTTGGATGAAGCAACTGCACTTGCAGACCCGGAAAATGAATATCTGATTCAAAAAGCAATTTCAGAAATTACTAAAGACA AAACAGTCATTATGATTGCGCACAGGTTGTCCTCAGTTAAAAATGTAGACAAAATTTATGTGGTTGAAAATGGACGAATT GTTGAAGAAGGCAACCACCATACTCTGATTGATAGTGGGGGCATTTACTCTAGAATGTGGGATGAATTTAACCAATCAAT CCAGTGGAAAGTTAAAAGCGAGGTGATATGA Protein sequence : MPETQNKNKFIRLLNYSGNYKYLTIVGMFLSALSAICLLVPFVYIWDVVNALLAVAPDFTKAQNLDVYAINAFTFAVLGI ILNFFGLMGTHLSAFKNEKNMKDAAIKHLLKLPLGYFSNHTSGGLRKIIDYSTAKTEIFLAHQLFDLTGAIVTPIIFLIL LFSFDWRLGLICLIPIILCFVFMYPMFSKESRNSMEKYEKYLEEMNGEAVEYVRGIPVTKAFQQSIYSFKNFINAIKNYG KFSAEYSMSTHIPMTAFTVSINGFFALLIPAGILLAGSVVDVKFFANFMFYIIFTPICAVMMMKIMTVSQDWMLASCALD SIEAILNENPLVDPINPQKPKNHSIEFEGVYFDYENADGDEHILNDVNLKINENETVALVGPSGGGKTTIASLIPRFWDV NQGSIKVGDVDVRDISTKELMKNISFVFQNTTLFKDSIYNNVAIGRKGASRDDVKKALSLTQCDDIIDELPDGINTVIGS EGTYLSGGQQQRIALARAVLKDAPIIILDEATALADPENEYLIQKAISEITKDKTVIMIAHRLSSVKNVDKIYVVENGRI VEEGNHHTLIDSGGIYSRMWDEFNQSIQWKVKSEVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-109 | 42 |
