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Name : Msm_1292 (Msm_1292) Accession : YP_001273865.1 Strain : Methanobrevibacter smithii ATCC 35061 Genome accession: NC_009515 Putative virulence/resistance : Unknown Product : transcriptional accessory protein S1 RNA binding family protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1296853 - 1299000 bp Length : 2148 bp Strand : - Note : COG2183 DNA sequence : ATGATAGCTAAAACACTCGAAAAAGAATTAAACCTGGAACAATGGCAAGTAAACAAAGTAATCAGATTAATTGATGAGGG CAACACTATTCCATTTATTGCAAGATACAGAAAGGATGTTACCGGCTCTTTAAATGATGAACTTTTAAGAAAATTCGATG AAAGGCTTAAATATCTTAGAAACTTGGAAGATAAAAAAACCAAAATCATAGAGCGCATTGACAACTTAGGAAAGTTAGAC GACAACTTAAAAAATCAAATTCTTAATGCAGAAACATTAGTGGAACTTGATGATTTATATAGGCCCTATAAAAGCAAAAA AAGGACACGTGCAACAATAGCAAAACAAAAAGGTTTGGAACCGCTGGCCAGTCTTATTTTGGCTCAGGAAGTTAAAGAAC CTGTTTCCAAAATAGCTGAAAATTATGTTACAGACGAAGTTAAAACACCCAAAGAAGCTATTGAAGGAGCGCAAGACATA ATTGCTGAGATTATTTCTGACAATTCCACTTTTAGAAAAAAAATCAGACAGAATACTTTTTATAATGGAGTAATTGAAAC TAAAGCTAAAAATAAAGATGAATCTGCTTCAGGATATGAAATTTATTTTAATTATTCAGAAAAACTATCTAAAATTCCAC CACATAGGATATTAGCCATTAACAGAGCGGAAAATGAAGACATTATTAAAGTAAAAGTGGATATTGAAGAAGACGACATT ATCCAATACCTTAAAAGACACACACTTAAAAACTGCTCCAAAGTTCCTGAAATGATTGAATATAACCCTCATACCACCCC AATTATTACAGAATCTATTGAAGATTCATATAAACGTTTGATTTCACCGGCTATTGAGCGGGAAATTAGAAGTTATTTAA CTAAAAAGGCTGAAGAGAAATCTATTGAAGTTTTTGCTAAAAATTTAAGCCAACTTCTTATGGAAAGCCCCTTAAGTGGA AAAACTATTTTAGGATGGGATCCTGCTTTTAGAACAGGATGTAAATTAGCTGTTATTGATTCAACAGGTAAAGTTTTAGA AACATCCCTAATCTATCCAACTGAACCTCAAAATAAGGTTAAGGAATCTGAAAAAGTGGTACTTGATTTAATTAAAAAGT ACGATGTCGATGTAATAGCTATCGGAAATGGAACTGCTTCAAGGGAATCTGAAGAAATAGTGGCTAATATTATTAAAAAC ACTTCTGTTGAATACATCATTGTTAATGAAGCTGGCGCATCTGTTTATTCTGCAAGTAAACTGGCTGATGAAGAGTTTCC TGATTTTAATGAAGGTGAACGCAGTGCTGTTTCAATAGCCAGAAGACTGCAGGATCCGTTGGCTGAACTTGTTAAAATTG ATCCCAAATCTATTGGAGTTGGTCAGTACCAGCATGACATGAATCAGAAACAATTGAATGAGTCTTTAGGAGGAGTTGTT GAAAGAGTAGTTAATGAAGTTGGTGTTGATTTAAATACTGCTTCATCTAGCTTACTTAATTATGTTTCCGGAATTACCAA ATCAACTGCTAAAAATATCATTAGCTATAGAGAAGAAAACGGTAAATTCAACAACCGAAAAGAACTTTTAAATGTTAAAA AACTTGGTAAAAAGACTTTTGAGCAATGTGCAGGATTTGTAAAAATAGACAATCCCGAACATCCTTTAGACAACACTACA ATACATCCCGAATCTTACGATGCTGCAGTCAAACTTTTAGATAAATTGGGATACAGTTTGGCAGATATCGGTTCAGATAA CTTAAAATTAGATAACCTGAATTATGATGAATTATCTAAGCAGTTAGACGTTGGTGTTATTACCCTGCAGGATATTGTTA AAGAACTTAAAAAACCTGGAAGAGATCCTCGTGAAGACATGCCAAAACCTGTTTTAAGAAAAAATGTTTTATCAATAGAT GATCTAGAAGAAGGCATGATTATGCAGGGAACTGTTAGAAATATTGTTGATTTTGGAGCTTTTGTAGATATTGGAGTTCA TCAGGACGGATTAGTCCATATTTCACAGCTGGCTGACAAATTTGTAAAGCACCCTCTGGATATTGTAAGTGTCGGAGATA TTGTTGATGTTAAGGTTTTAGATGTTGATTTAGCTAGAAATAGAATACAATTATCAATGTTAATATAA Protein sequence : MIAKTLEKELNLEQWQVNKVIRLIDEGNTIPFIARYRKDVTGSLNDELLRKFDERLKYLRNLEDKKTKIIERIDNLGKLD DNLKNQILNAETLVELDDLYRPYKSKKRTRATIAKQKGLEPLASLILAQEVKEPVSKIAENYVTDEVKTPKEAIEGAQDI IAEIISDNSTFRKKIRQNTFYNGVIETKAKNKDESASGYEIYFNYSEKLSKIPPHRILAINRAENEDIIKVKVDIEEDDI IQYLKRHTLKNCSKVPEMIEYNPHTTPIITESIEDSYKRLISPAIEREIRSYLTKKAEEKSIEVFAKNLSQLLMESPLSG KTILGWDPAFRTGCKLAVIDSTGKVLETSLIYPTEPQNKVKESEKVVLDLIKKYDVDVIAIGNGTASRESEEIVANIIKN TSVEYIIVNEAGASVYSASKLADEEFPDFNEGERSAVSIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKQLNESLGGVV ERVVNEVGVDLNTASSSLLNYVSGITKSTAKNIISYREENGKFNNRKELLNVKKLGKKTFEQCAGFVKIDNPEHPLDNTT IHPESYDAAVKLLDKLGYSLADIGSDNLKLDNLNYDELSKQLDVGVITLQDIVKELKKPGRDPREDMPKPVLRKNVLSID DLEEGMIMQGTVRNIVDFGAFVDIGVHQDGLVHISQLADKFVKHPLDIVSVGDIVDVKVLDVDLARNRIQLSMLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-134 | 43 |
