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Name : Msm_0990 (Msm_0990) Accession : YP_001273563.1 Strain : Methanobrevibacter smithii ATCC 35061 Genome accession: NC_009515 Putative virulence/resistance : Unknown Product : nitrate/sulfonate/bicarbonate ABC transporter, ATPase component Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 950836 - 951585 bp Length : 750 bp Strand : - Note : COG1125 DNA sequence : ATGAGTTCAATCATTGAATTTAAAGATATAAGTAAACATTATTCTGATAGTGATTTTTCAATAGATAATTTCAATTTAAG TGTTGAAAAAGGGGATTTTGTCACGATGATTGGCGGTTCAGGATGTGGAAAAACCACTATTTTAAAAATGATTAATGGAT TAATCACTCCTGATAGAGGTAGTGTCATTGTAAATGGGAAGGATGTTTCTGAATCTGATATTGTTGAATTAAGGCGAAGA ATCGGATATGCAATTCAGGGAACAATGTTGTTTCCTCATTTGAATGTTCGGGAAAATATAGCTTATGTTCCTAATTTGAT CCATGAAAATGACAGTGAAAAAACTGATGAGGCTATTGATAAGTGGCTGGATATTGTTGGGTTGGATTCTTCTATTTTAA ACAGGTATCCTCATGAACTTTCCGGAGGTCAACAGCAAAGAGTAGGTATTGCAAGAGCACTTGCTGCGTCACCTGCGATT TTATTGATGGATGAGCCTTTCAGTGCCGTTGATGAGATAACAAGAACTCAGCTGCAAAAAGAAATGAAAGAAATCCATGA AAAAACAAAAATTACTGTAATGTTTGTTACTCATGATATTAGGGAAGCATTGTATCTTGCTGATAAAGTATTGGTTATGC AAAATGGGATTGTTCATCAGTTTGATACTCCAAATGAGGTGTTAAATCATCCGGCAACTCCTTTTGTTGAAAAATTATTG GAAAGAACAAAATTTATTTTAAATAAATAA Protein sequence : MSSIIEFKDISKHYSDSDFSIDNFNLSVEKGDFVTMIGGSGCGKTTILKMINGLITPDRGSVIVNGKDVSESDIVELRRR IGYAIQGTMLFPHLNVRENIAYVPNLIHENDSEKTDEAIDKWLDIVGLDSSILNRYPHELSGGQQQRVGIARALAASPAI LLMDEPFSAVDEITRTQLQKEMKEIHEKTKITVMFVTHDIREALYLADKVLVMQNGIVHQFDTPNEVLNHPATPFVEKLL ERTKFILNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 5e-52 | 49 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 4e-51 | 48 |
