Gene Information

Name : Msm_0986 (Msm_0986)
Accession : YP_001273559.1
Strain : Methanobrevibacter smithii ATCC 35061
Genome accession: NC_009515
Putative virulence/resistance : Virulence
Product : conjugated bile salt acid hydrolase (CBAH)
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : 3.5.1.11
Position : 945440 - 946390 bp
Length : 951 bp
Strand : -
Note : COG3049

DNA sequence :
ATGTGTACTGCTGCAAATTATTTAACAAAATGCCATTATTTTGGCCGTAATTTTGACTATGAAATTTCATATAATGAAAG
AGTAACGATAACTCCTAGAAACTATCCTTTAATATTCAGGGATACTGAGGACATTGAAAATCATTATGGGATTATTGGCA
TAGCTGCAGGTATTGATGAATATCCTTTGTATTATGATGCATGTAATGAGAAAGGATTAGCTATGGGGGGATTAAACTTT
CCGGATTACTGTGACTACAAACCACTAGATAAATCTAAAGTTAACATAGCTTCTTTTGAGATTATTCCATATATATTATC
TCAAGCAAAAACCATCAGTGATGCCGAAAGGTTATTGGAAAACTTAAATATTTCAGATGAGAAATTTTCCGCCCAGTTGC
CTCCATCTCCACTTCATTGGATTATTTCAGATAGGAATGCTTCAATTGTTGTAGAGGTTGTAGAGGAAGGACTGGATATT
TATGATAATCCTGTAGGAGTTTTAACAAACAACCCTCCTTTTGATAAACAGCTATTTAATTTAAATAATTATATGGCATT
ATCAAACAGAACGCCTGAAAATACCTTTGGAGGCAATTTGGATTTGGCAACTTATAGTCGGGGAATGGGTTCAATTGGTC
TTCCGGGGGATGTTTCTTCACAGTCCCGTTTTGTAAAAGCAGCTTTTGTTAAAGAAAATTCCGTTTCCGGAGATTCTGAA
AAAGAAAGTGTGTCTCAGTTTTTCCATATTCTGGCATCTGTTGAACAGCAAAAAGGATGTACGTTAGTGGAAGAACCTGA
TAAATTTGAGTATACTATTTATTCAGACTGTTACAATACAGATAAGGGAATATTGTATTATAAAACATATGATGGTCCTC
AAACATCTGTTAATATACATGATGAGGATTTGGAAACCAATCAGTTAATTAATTTTGAGTTGGTTGATTAA

Protein sequence :
MCTAANYLTKCHYFGRNFDYEISYNERVTITPRNYPLIFRDTEDIENHYGIIGIAAGIDEYPLYYDACNEKGLAMGGLNF
PDYCDYKPLDKSKVNIASFEIIPYILSQAKTISDAERLLENLNISDEKFSAQLPPSPLHWIISDRNASIVVEVVEEGLDI
YDNPVGVLTNNPPFDKQLFNLNNYMALSNRTPENTFGGNLDLATYSRGMGSIGLPGDVSSQSRFVKAAFVKENSVSGDSE
KESVSQFFHILASVEQQKGCTLVEEPDKFEYTIYSDCYNTDKGILYYKTYDGPQTSVNIHDEDLETNQLINFELVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 3e-90 62
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 3e-90 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msm_0986 YP_001273559.1 conjugated bile salt acid hydrolase (CBAH) VFG2162 Protein 2e-93 62