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Name : Lreu_0097 (Lreu_0097) Accession : YP_001270706.1 Strain : Lactobacillus reuteri DSM 20016 Genome accession: NC_009513 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 121729 - 123036 bp Length : 1308 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATATTAAAAAGATTCGTCAAGAACCTGATTTTTATAAGGAAAAGTTAGCTACGCGTGGTGTAAAACCAGAAGA AATTGATGAAGTTATTGCGTTAGATAAAAAGCGGCGGGAATTGCTCCAACAAACTGAAACAATGAAGGCGCAACGTAATG AAGCATCAAAGAAGATTGGAGAAGCTAAGCGTAATGGTGAATCCGCCGATGCTGCCATTAAGGAAACTCGTGAACTTGGT GATAAGATCAAGGAATTGGATACTGAAGTTGAAGCAAATGATGCTGAACTTCATGATAAGATGGCTCATCTTCCGAATGT TCCACATGATGGTGTTCCAGTTAGCTTAACGGAAGACGGTGCCGTTGAATTACGGAAAGTCGGTAAGGTGCGGGACTTTG ATTTTGAACCTAAGCATCACTGGGATATCGGTGAAAACCTTGGTATTTTAGACTTTGATCGCGCTGGTAAGGTTTCTGGT GCGCGTTTTGTCTACTACTTAGGTCTTGGTGCTCAGCTTGAACGGGCAGTTTATAACTTCATGCTTGATGAACACATGAA GGAAGGATATACCGAAGTCTTACCACCATATATCGTCAATGCTGATTCAATGTATGGTACTGGTCAATTCCCTAAGTTCA AAGAAGGAGTTTACCAGGTTAACGGTGAGGATATGACATTGATCCCAACTGCTGAAGTTCCATTGACTAATTACTACCGT GGCGAAGTTATCCCAACTGAAGAATTACCGGTTTATGTTACTGCTTTAACACCATCATTCCGTTCTGAAGCGGGAGCAGC GGGTCGTGATACCCGAGGATTGATCCGGATGCACCAATTTAACAAGGTAGAAATGGTTAAGTACACTAAACCAGAGAACT CATGGGATGAACTTGAAAAGATGACGGCTAACGCTGAAAACATCTTGAAGAAGTTAAACTTGCCATACCATGTTATTACC TTAACTACTGGTGACATGAGCTTTACGGCATCTGAAACCCATGACCTTGAATTGTGGATGCCAGCACAAAATAAGTATCG TGAAGTTTCGAGTTGTTCAAACTGCTTGGACTTCCAGGCACGGCGGATGCACACACAATACCGGGATGAAAATGGTAAGT TACAATATGTTCACACACTTAACGGTTCTGGTTTAGCCGTTGGTCGGACAGTTGCAGCTATCTTGGAAAACTATCAAAAC GCTGATGGTTCTGTAACAATTCCAGAAGTATTGGTACCATACATGCATGGTGTTACTAAGATTACTAAGGAAAATGCGGT TCCTTTCCGTAATAAAGTTAATAAATAA Protein sequence : MLDIKKIRQEPDFYKEKLATRGVKPEEIDEVIALDKKRRELLQQTETMKAQRNEASKKIGEAKRNGESADAAIKETRELG DKIKELDTEVEANDAELHDKMAHLPNVPHDGVPVSLTEDGAVELRKVGKVRDFDFEPKHHWDIGENLGILDFDRAGKVSG ARFVYYLGLGAQLERAVYNFMLDEHMKEGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQVNGEDMTLIPTAEVPLTNYYR GEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDELEKMTANAENILKKLNLPYHVIT LTTGDMSFTASETHDLELWMPAQNKYREVSSCSNCLDFQARRMHTQYRDENGKLQYVHTLNGSGLAVGRTVAAILENYQN ADGSVTIPEVLVPYMHGVTKITKENAVPFRNKVNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-133 | 64 |
