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Name : Lreu_0083 (Lreu_0083) Accession : YP_001270695.1 Strain : Lactobacillus reuteri DSM 20016 Genome accession: NC_009513 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 99279 - 100961 bp Length : 1683 bp Strand : + Note : PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain DNA sequence : ATGGAAAACAATCATTGGTGGAATAAATCGGTTGTTTATCAAATTTATCCCAAAAGTTTTCAGGATACCAATCATGATGG TGTCGGTGACCTTCGTGGAATAATTGATCGTCTTGATTACATTAAAAAATTAGGCGTTGATGTCATTTGGTTGAACCCCA TTTATGAGTCGCCACAAGTTGATAATGGTTATGATATTAGCAACTATGAAGCAATTAACCCAACTCTTGGCAACATGGAT GATTTTCAAGAATTGATTGATGGCATCCATGAACGTGGAATGAAATTGGTCATGGACTTAGTTGTTAACCATACTTCTGA CCAACATGACTGGTTTAAGGAATCACGAAAGAGCAAAGACAATCCATATCGTGATTATTATATTTGGCGTGATGGTAAGA ATGGTGAAGAGCCAAATAATTGGGGATCGTATTTCTCTGGAGCTGCTTGGAAATATGATGATGAATCCGGCCAATATTAC CTTCATCTTTTTGCTCCAGAACAACCAGATCTAAATTGGGAAAATCCGAAAGTTCGGCACTCTGTTTATGACATGATGAA CTGGTGGGCTGCGAAGGGTGTCGATGGGTTTCGGATGGACGTTATTAACCTAATTTCTAAGCCGGATGGATTGCCAGATG CTAACAAGAACGAAGATGAGAAATACGCCAATGTTGAGCCATTAGTATCAAATGGTCACCGCATTCATGAATTCTTACAA GAAATGAATAAGAATGTTATGAGTAAGCATAAAATGGTGACAGTTGGTGAAACACCGGGCGCTACACCGGAAGATGCCGA GAAGTATGCCAGTCTTGATAATAAGGAATTAAATATGATTTTCCAGTTTGAACATATGGGCCTTGATAGTAATCCTAATC CAGCCCTTGGCAAGTGGGATGATCGCAAGACGACCCTTAAAGACTTACGGGCAAACTTAACGAAGTGGCAAGAAAAATTG TATGGCAAGGCTTGGAACTCCCTTTATTGGAACAACCATGATCAGCCACGCGTTGTATCACGTTTTGGTAATGATCAGAC GGAAGATTATCGAGTTAAATCTGCCAAGATGTTAGCGACTATGACCCATATGATGCAAGGAACGCCATATATCTATGAAG GGGAAGAAATTGGCATGACTAACGCCTATTTCCCAAAGCTTGAAGATTACGTCGACCTTGAATCGATTAATGCCTACCAC CAACTTGTTGATGACCAACATTTACTTGATGGCAAGACAATGATGAAGTACATTGCAATTCATTCTCGGGATAATGCACG GACACCAATGCAATGGGATGATAGCGAATATGCAGGATTTTCCGACCATACCCCATGGGAAAAGGTTAATCCAAATTACA AGCAGATTAATGTCAAAGATGCATTAGCTGATAAGAATTCAATTTTCTATTACTATCAAAAATTGATTGAACTACGACAC TCAATGCAGGTAATTACTAATGGAAAGTATGCGTTAGTTCCTGGTAATGAAGATGATGAACAGATCTTTGCATATACACG GCAAGATGATAACACTACTTTGTTGGTAATCTTGAACTATACTGATGAGACTGTTAACCGCCATTATAATGTGCCAGCTG ATGCGAAGTTACTAATTAGTAATTATGAGGATGATCAAAATGATACTATCCGGCCATACGAAGCTAAGGTTTATCAATAC TAG Protein sequence : MENNHWWNKSVVYQIYPKSFQDTNHDGVGDLRGIIDRLDYIKKLGVDVIWLNPIYESPQVDNGYDISNYEAINPTLGNMD DFQELIDGIHERGMKLVMDLVVNHTSDQHDWFKESRKSKDNPYRDYYIWRDGKNGEEPNNWGSYFSGAAWKYDDESGQYY LHLFAPEQPDLNWENPKVRHSVYDMMNWWAAKGVDGFRMDVINLISKPDGLPDANKNEDEKYANVEPLVSNGHRIHEFLQ EMNKNVMSKHKMVTVGETPGATPEDAEKYASLDNKELNMIFQFEHMGLDSNPNPALGKWDDRKTTLKDLRANLTKWQEKL YGKAWNSLYWNNHDQPRVVSRFGNDQTEDYRVKSAKMLATMTHMMQGTPYIYEGEEIGMTNAYFPKLEDYVDLESINAYH QLVDDQHLLDGKTMMKYIAIHSRDNARTPMQWDDSEYAGFSDHTPWEKVNPNYKQINVKDALADKNSIFYYYQKLIELRH SMQVITNGKYALVPGNEDDEQIFAYTRQDDNTTLLVILNYTDETVNRHYNVPADAKLLISNYEDDQNDTIRPYEAKVYQY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-156 | 55 |
