Gene Information

Name : Lreu_0672 (Lreu_0672)
Accession : YP_001271274.1
Strain : Lactobacillus reuteri DSM 20016
Genome accession: NC_009513
Putative virulence/resistance : Unknown
Product : HK97 family phage major capsid protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3740
EC number : -
Position : 738741 - 740261 bp
Length : 1521 bp
Strand : +
Note : TIGRFAM: phage prohead protease, HK97 family; phage major capsid protein, HK97 family; PFAM: peptidase U35, phage prohead HK97; phage major capsid protein, HK97

DNA sequence :
ATGGAGAAACGACTAACAACTAACGCAGGTTTACAAACGGTAAGCCCTAAAGAAGACCCAACAAAAGACCAGCAAGACAA
CCAAGATGAAACGCAAGCCTCACAGCCTAATACAGTTGAAGGCTATGCGTTACTCTTTAATCAACCCAGCAAGGACTTAG
GCGGTTTTGTTGAAGTGATTGACCCTAGCGCCCTTGATAACGTAGACCTATCCAATGTAGTTATGCTTGATCAACACGAC
TACACTAAGCCACTAGCAAGCGTTAAGGCTGGTTCATTACAACTTGATGTGGACGATAAGGGGCTTCACTTCAAGGCAAC
TATTGATCCAAGTGTAAGTTACGCAAGTGACACTCTTAATAATGTTAAGAATGGGAACATTAATTCTATGTCTTTCCGTT
TTGATGTTGATGATGGTTCTGACAGTTGGACACGTGACGACAACGGACAAATTACACGCACCGTTAATCAGATTAAAGAT
TTATTTGAGGTTTCAACCGTTACAGTGCCTTCATATGATCAGACAAATGTTGATGTAGATAAAACAAGCATTCGTAGTTA
CAACCAATTTATCGAAAGTGAGGAACATAATAAAATGCAACACACAATCTTAGACCCCAAAAACAATACAGAACAACCAG
CTAACGCCTTTGAAAGCTTCATTCGTTCACGTGGTGAAACCCGTGACGGATTAACAACTAAGGGGGCAGAAGCTGTTATC
CCAGAAGAAGTTGTTACTCCAGTCCTAGACTTAAAGAACAGTGCTTATAACTTAGCGAAGTACGCTACTGTAAAGACTGT
AGGGACTGGTTCCGGTCATTATCCAATCGCTACCCGTTACAACACAGCGGTACTTACTACTAAGGAAGAACAAGCAGAAA
TTGCTGATGTAGACGCTAATATGTTTGAAGATGTGAAGTTTGATGTAAAGACCCGTGCCGGTAAGATTGCACTATCAAAT
GAAGTTGTTGACGATTCAGAAGTTGATATTGTATCTGAAGTAAAGAACCAACTTCAAAAGTTAGTTGATAACACTGATAA
CGCTGAAATTATCAAGGTATTACAAGGCGATAACTTTACTAAGAAAACCGTAGCTAATGTTGATGACTTGAAGCAAGTAT
TCAACGTTGACCTTGACCCAGCCTTACAAAGTACTTCTACATGGTTAGTAAATCAATCAGCTTTCCAAGTATTAGATACT
TTGAAAGACAATGAAGGACGTTACTTATTACAACCAGATGTAACCGCTCCTAGTGGATTTTCTTTACTTGGTCAACCCGT
TGTTAAGATTAGTAATAAGTTCTTACCAGATAACACGGACGGTTCACATCCAATGATTTTAGGTGATATTTCAGAAGCGG
TAGCAGTATTCCGGCGTAATCAAGTTACAGCCCAATGGGACAAGTTCGATAGTTACAGTCAAGGCTTATCTGTTATCGTC
CGTAACGACTACCAACCAATTAGTAATGACGCTGCTTTCAATCTCTCTTTAACCACAACTAAGGCAACCGAAAGTAAATA
A

Protein sequence :
MEKRLTTNAGLQTVSPKEDPTKDQQDNQDETQASQPNTVEGYALLFNQPSKDLGGFVEVIDPSALDNVDLSNVVMLDQHD
YTKPLASVKAGSLQLDVDDKGLHFKATIDPSVSYASDTLNNVKNGNINSMSFRFDVDDGSDSWTRDDNGQITRTVNQIKD
LFEVSTVTVPSYDQTNVDVDKTSIRSYNQFIESEEHNKMQHTILDPKNNTEQPANAFESFIRSRGETRDGLTTKGAEAVI
PEEVVTPVLDLKNSAYNLAKYATVKTVGTGSGHYPIATRYNTAVLTTKEEQAEIADVDANMFEDVKFDVKTRAGKIALSN
EVVDDSEVDIVSEVKNQLQKLVDNTDNAEIIKVLQGDNFTKKTVANVDDLKQVFNVDLDPALQSTSTWLVNQSAFQVLDT
LKDNEGRYLLQPDVTAPSGFSLLGQPVVKISNKFLPDNTDGSHPMILGDISEAVAVFRRNQVTAQWDKFDSYSQGLSVIV
RNDYQPISNDAAFNLSLTTTKATESK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HMPREF0351_12127 YP_006376733.1 bifunctional family U35 bacteriophage prohead peptidase/major capsid protein Not tested Not named Protein 2e-115 54