|
Name : Lreu_0045 (Lreu_0045) Accession : YP_001270658.1 Strain : Lactobacillus reuteri DSM 20016 Genome accession: NC_009513 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 47696 - 49933 bp Length : 2238 bp Strand : + Note : PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGGCTCAAAACCCAATGAATCCATTTGACAACGACATGAATGACATCTTTAATCAATTAATGGGTGGCATGAATGGTTT CAATTCTGATAATCGGCGTTACCTAATCAATGGTCGTGAAGTAACACCAGAAGAATTTGCTGAATATCGTAGAACTGGTC AATTGCCAGGCGGTGCAAATCCTCAACAAGGTGGGCAACCTGGCCCTCAACCTAACGCAGGTAAGGACAGTATCTTACAC AAGTTAGGTCGAAACTTAACTCAAGAAGCTCGTGAACATGAACTTGACCCTGTTATTGGTCGGAACAAGGAAATCCAAGA AACAGCTGAAATTTTAAGCCGGCGGACAAAGAACAACCCTGTATTAGTTGGGGATGCTGGTGTTGGTAAGACTGCTGTTG TTGAAGGTTTAGCACAAGCAATTGTTTCCGGCGATGTACCAGCTGCTATCAAGGACAAGGAAATTATCAGTATCGATATT TCTGGCCTTGAAGCAGGTACTCAATATCGTGGTAGTTTTGAAGAAAACATGCAAAAGTTGGTTGATGAAGTCAAGAAGGC TGGAAATATCATCCTCTTCTTCGATGAAATTCACCAAATTATTGGTGCCGGTTCAACTGGTGATTCTAGTGGTTCCAAGG GTATGTCTGACATTATTAAGCCAGCATTATCCCGTGGTGAACTAACAGTTATCGGTGCAACTACTCAAGATGAATACCGG AACACTATTATGAAGGATGCTGCATTAGCACGGCGGTTCAATTCTGTTACTGTTAATGCTCCAAGCAAGGCTGATACAGT GGCCATCCTTAAAGGTATCCGTGACTTGTACGAACGTCACCACAATGTAAAGTTACCAGATGACGTTCTCCAAGCTGCTG TTGATTACTCTGTTCAATACATGCCACAACGCGCATTACCTGACAAGGCTATCGACTTAATCGATATGACCGCTGCTCAC TTAGCAGCAAAGCACCCAGCACGTGATGCTAAGGCAATTGAAAAAGATATCGAAGCAGAAGAAAAGAAGCAAAAAGCGGC TGCTAAGAAAGAAGATTACAAGGCTGCCCAAGATGCCAAGGAAAAGATTGCTGACTTGAAGAAGCAATTGAGTGAAAACT CTGAATCTGAAAAGGTTACTGCTACTCCAGAAGACGTTGCTAAGGCTGTAGAACAAATGACTGGTATTCCTGTTTCTAAG ATTGGTGCTAGTGACGTTGAACGCTTAAAGGACATGGACAAGCGGCTTGAAGGTAAGGTTATTGGCCAAGACAAAGCTGT TGAAGCAGTTGCTCGTGCTATTCGTCGTAACCGTGCTGGATTTGACGAAGGCGATTCACCAATTGGTAGTTTCCTCTTCG TTGGACCTACTGGTGTTGGTAAGACTGAACTTGCTAAGCAACTAGCCCTTGATATGTTTGGTAGCAAGGATGACATTATT CGGTTAGATATGTCTGAATACTCTGACCGGACAGCCGTATCTAAGATGATCGGTGCTACTGCTGGTTATGTTGGTTACGA AGACAACGGTAATACCTTGACTGAAAAGGTTCGTCGTCACCCTTATTCAATTATTCTTCTTGATGAAATTGAAAAGGCTA ATCCACAAGTTATCACCCTCTTGCTTCAAGTACTTGATGATGGTCGGTTAACTGATGGACAAGGTAACACTATTGACTTT AAGAATACTGTTATCATTGCTACATCAAATGCCGGCTACTCCAACGATGCTCCAGTTAAGATGGGCCGGAACGAAGATGA AGAAGACTTAATTAAGAAGTTGACTACTTACTTCCGTCCTGAATTCTTGAACCGGTTCAACGCTATTGTTGAATTCCACA GCTTGACTAAGGAAGACTTGAAGCAAATCGTTGACTTAATGCTTGCTGAAGTTAACCGGACATTGGCTAAGAAGGGCATG GATGTTAAGGTTACTGATACTGCAAAGCAATACCTTATTGATGAAGGTTACGATGAAGCCATGGGTGCTCGTCCTCTTCG TCGGGTTATCGAACGTGAAATCCGTGATAAGGTAACTGATTACTACCTTGACCACCTCGATGCAAAGAATCTTGTTGCTG AAATGAAGGATGGCCAACTTGTAATTGTTGACGCTAAGGACGCCTCAAAAGACGATAGTAAAGAATATACTTCACCATCT GAAAAGAAGGATGAAGAAAAAGACGATAAGAAGGAAGAAGACAAGAAGTCTGACGAAGATAAGAAAGACGAAAAGTAA Protein sequence : MAQNPMNPFDNDMNDIFNQLMGGMNGFNSDNRRYLINGREVTPEEFAEYRRTGQLPGGANPQQGGQPGPQPNAGKDSILH KLGRNLTQEAREHELDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVSGDVPAAIKDKEIISIDI SGLEAGTQYRGSFEENMQKLVDEVKKAGNIILFFDEIHQIIGAGSTGDSSGSKGMSDIIKPALSRGELTVIGATTQDEYR NTIMKDAALARRFNSVTVNAPSKADTVAILKGIRDLYERHHNVKLPDDVLQAAVDYSVQYMPQRALPDKAIDLIDMTAAH LAAKHPARDAKAIEKDIEAEEKKQKAAAKKEDYKAAQDAKEKIADLKKQLSENSESEKVTATPEDVAKAVEQMTGIPVSK IGASDVERLKDMDKRLEGKVIGQDKAVEAVARAIRRNRAGFDEGDSPIGSFLFVGPTGVGKTELAKQLALDMFGSKDDII RLDMSEYSDRTAVSKMIGATAGYVGYEDNGNTLTEKVRRHPYSIILLDEIEKANPQVITLLLQVLDDGRLTDGQGNTIDF KNTVIIATSNAGYSNDAPVKMGRNEDEEDLIKKLTTYFRPEFLNRFNAIVEFHSLTKEDLKQIVDLMLAEVNRTLAKKGM DVKVTDTAKQYLIDEGYDEAMGARPLRRVIEREIRDKVTDYYLDHLDAKNLVAEMKDGQLVIVDAKDASKDDSKEYTSPS EKKDEEKDDKKEEDKKSDEDKKDEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-125 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lreu_0045 | YP_001270658.1 | ATPase | VFG0080 | Protein | 4e-140 | 49 |
| Lreu_0045 | YP_001270658.1 | ATPase | VFG0079 | Protein | 6e-133 | 48 |
