|
Name : Lreu_0377 (Lreu_0377) Accession : YP_001270983.1 Strain : Lactobacillus reuteri DSM 20016 Genome accession: NC_009513 Putative virulence/resistance : Unknown Product : acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 425941 - 427110 bp Length : 1170 bp Strand : + Note : TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein DNA sequence : TTGGAAAATGATGAAAAGGTAAAGCTATTACAGAAGTTGATCCAGATAAATACTGTAAATGGTAATGAAGAAGACGAAGC TAATTATATTAAAAGGGTCTTAGAAGCTCATCATATTTCTTGCAAACTAGTTTCCTTTGCACCAAATCGAACCAATTTAA TTGCAGAGATTGGTAATGATAAGGGGCCGGTACTCGCCCTAGCTGGACACTTGGATACTGTTGATCCAAGTGATCCGCAA AAATGGACATACCCGCCATTCGCTGGCCAATTAGTAGACCGTAAAATCTATGGTCGGGGTGCAGTTGATATGAAGTCCGG GTTGGCAGCCATGGTGGGTGCTTTAATTGAGCTTCAAGAAGCAGATTTGCCAAAACATGGGAAAGTTCGCCTGATTGCCA CTGTTGATGAAGAAGTTGGAGGAAAGGGTTCGCTTGAACTTACTGATCAAGGATACGTACACGATGTTGACGCAATGATC ATTGGGGAAGCTACCACTGGTCAAATCGAGTATGCCCACTGTGGCTCCTTTGATTATATTGTTGAATCTCATGGGAAATT AGCTCATAGTTCACAACCAGAATTAGGGGCAAATGCTGTTACAAATCTAGTGAAATTTATCAATAAAGAATCACGGGCAT TTGACGATGCAGCAGTAAGTCCCACCCTAGGAAAATTAATTCATAGTGTGACTGTCTTTCATGGTGGAGAGCAGTTAAAC TCAATTCCTGATTTTGCATACTTAAAAGGAAATGTTCGCACGATTCCAGAATGTGATAATGTGGAGACGCAAAAAAGATT ACAGGATATTATTGATGGGTTAAACAAGAAACCTAAAATTCAATTGAAGTTAAAAGTTGTTGCCAGTTTTATGCCAGTGG TTACAAATAAGCAAGATCGCTTCATTGCCCTTGCTCAAACGGCAATTAAAAAGGTTAGCGGCAGGCAACCGGATGTAGTG ATTTCTCATGGGGCAACGGATGCATCCCGCTATGTTTTAGACAATCACAACTTTCCAATAATTGAATACGGACCAGGGAT TGAAAAGTTATCACACCAAATTGATGAACGTATTGCGCTTGATGATTATTTAACGGCTCAGCAAGCTTATGTTGAAATTG CTAAACAATATTTGAATAATACTAAAGACGATGAACAGGCTAGTAGTTAA Protein sequence : MENDEKVKLLQKLIQINTVNGNEEDEANYIKRVLEAHHISCKLVSFAPNRTNLIAEIGNDKGPVLALAGHLDTVDPSDPQ KWTYPPFAGQLVDRKIYGRGAVDMKSGLAAMVGALIELQEADLPKHGKVRLIATVDEEVGGKGSLELTDQGYVHDVDAMI IGEATTGQIEYAHCGSFDYIVESHGKLAHSSQPELGANAVTNLVKFINKESRAFDDAAVSPTLGKLIHSVTVFHGGEQLN SIPDFAYLKGNVRTIPECDNVETQKRLQDIIDGLNKKPKIQLKLKVVASFMPVVTNKQDRFIALAQTAIKKVSGRQPDVV ISHGATDASRYVLDNHNFPIIEYGPGIEKLSHQIDERIALDDYLTAQQAYVEIAKQYLNNTKDDEQASS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 2e-71 | 42 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 4e-70 | 42 |
