|
Name : Lreu_0365 (Lreu_0365) Accession : YP_001270971.1 Strain : Lactobacillus reuteri DSM 20016 Genome accession: NC_009513 Putative virulence/resistance : Unknown Product : protein translocase subunit secA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 413454 - 415817 bp Length : 2364 bp Strand : + Note : TIGRFAM: preprotein translocase, SecA subunit; PFAM: helicase domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region DNA sequence : ATGGCCAATATTCTAAAAAAATGGATTGAAAGCGATCGTCGTGAATTACGGCGAATTAACAAAATAGCAAATAAAGTCGA GAGTTATGCTAAACAAATGTCTGAACTAACTGATGAACAGCTTCAGGCAAAAACTGATGAATTTCGGGAACGTTATAAAA AAGGTGAATCCTTGGATCATATGTTGCCAGAAGCATTCGCAGTTTCTCGTGAAGGTGCTAAGCGGGTCTTAGGACTATAT CCATTCCATGTCCAGATCATGGGGGGGATTGTTCTCCACGAAGGTAATATTGCAGAAATGCGGACTGGTGAAGGTAAGAC ATTAACTGCCACAATGCCGGTTTACCTTAATGCGATCTCGGGAAAAGGTGTTCATGTTATTACTGTTAACGAATACTTGT CAAAGCGTGATGCTACCGAAATGGGACAGCTTTATAATTGGCTTGGATGTTCTGTTGGTATTAACAACTCAGAGATGAGC CCTGATCAAAAACGAGAAGCATATAAAGCTGATATTATGTATTCCACTAATAGTGAAATTGGATTTGATTACCTTCGTGA TAACATGGCCGTTTACAAAGAAGACCAAGTCCAACGTGGGTTAAACTATGCTTTAGTTGATGAGGTGGATTCAATTTTAA TTGATGAAGCGCGAACACCGTTAATCATTTCAGGACCAGGAACGGGAACTTCTAAGTTATACAAACAGACTGATCGGTTT GTTAAGCAGTTAAAGAAAGATGTTGATTACAAGATTGATCTTGAATCAAAGACAGTTTCATTAACTGATGAAGGAATTAA AAAAGCTGAAAAATACTTCAACCTAAAGAACCTATATGATCCAGAAAATACTGCGTTGACCCACCACTTGGATCAGGCTT TGCGTGCTAACTATATCATGCTTTTAGATAAGGATTATGTGGTTCAAGATGGTGAAGTATTAATTGTTGACTCCTTTACT GGACGTGTAATGGAAGGTCGGCGTTTCTCTGATGGCCTGCACCAAGCTATTGAAGCCAAAGAAGGCGTAGAAATTCAAGA AGAAAACAAGACAATGGCTAACATTACATACCAGAACTTATTCCGGATGTATAACAAACTGGCGGGGATGACTGGTACTG CTAAAACTGAACAAGAAGAATTCCGTGAAATTTACAACATGGAAACTATTACTATCCCCACTAACCGTCCCGTTCAGCGG AAAGACGAGCCTGACTTGCTTTATCCAACATTACAAAGTAAGTTTGCAGCTGTTGTCGATCGGATTAAGAAACTTCATGC TAAAGGGCAACCAATTTTAGTTGGGACAGTTGCTGTTGAAACTTCTGAATACCTATCTCAACTTCTTGATAAAGAGAACA TTCCGCATGTTGTTTTAAACGCTAAGAATCACGCTAAGGAAGCGGAAATTGTTAAAAATGCTGGTCAAAAAGGTGCAGTA ACTATCGCTACCAACATGGCTGGGCGGGGGACAGATATTAAGTTAGGCCCTGGAGTACGTGAAATTGGTGGACTTGCGGT TATTGGTACTGAACGACATGAATCACGGCGGATTGATAATCAGCTTCGTGGACGTTCTGGACGGCAAGGTGATCCTGGTC TATCACAATTCTACCTATCGCTTGAAGATGATTTGATGAAGCGATTTGGTGGGGACCGGATCAAAGCCTTCTTAGAACGG ATGAAGGTTAATGATGAAGATGCTGTCATTAAAAGTCGTTTCTTAACTCACCAGGTTGAATCAGCTCAAAAGCGGGTTGA AGGTAACAACTACGATTCACGGAAGAACGTTCTTCAATATGATGATGTTATGCGTGAACAACGTGAAATCATCTATAAAG AGCGGCAACAAATTATCACTGAAGATAAGTCGCTGAAGTGGGTCCTTATGCCAATGTTTAGACGGACAATCCAGCGTGAA GTTGATCAACATACCCTTGGTGACAAGAAGGATTGGGATTTACAAGGAATTGTTGACTTTGCAGAAGAAGTCTTAATCAA GCCTGATACCATCACAGTTAAGGATCTAGAAGGTAAATCACCTCAAGAAATGGTGGATTACTTGATGACATTTGCCCAGG GAGTTTATAAGGAAAAGCAAAAACAACTTTATGATCCAGCACAAATGCTTGAATTTGAAAAGGTTGTTATTTTGCGGGTA GTTGACTCACACTGGACTGATCATATTGACATCATGGATCAATTCCGGCAGTCAGTTGGCTTACGTGGATATGGACAATT AAATCCATTGGTTGAATATCAAACTGCTGGTTATCACATGTTTGAACAAATGATTGCTGATATTGAGTACGAAACTACTC GACTCTTCATGAAGTCAGAAATTCGGCAAAATGTAACACGTTAA Protein sequence : MANILKKWIESDRRELRRINKIANKVESYAKQMSELTDEQLQAKTDEFRERYKKGESLDHMLPEAFAVSREGAKRVLGLY PFHVQIMGGIVLHEGNIAEMRTGEGKTLTATMPVYLNAISGKGVHVITVNEYLSKRDATEMGQLYNWLGCSVGINNSEMS PDQKREAYKADIMYSTNSEIGFDYLRDNMAVYKEDQVQRGLNYALVDEVDSILIDEARTPLIISGPGTGTSKLYKQTDRF VKQLKKDVDYKIDLESKTVSLTDEGIKKAEKYFNLKNLYDPENTALTHHLDQALRANYIMLLDKDYVVQDGEVLIVDSFT GRVMEGRRFSDGLHQAIEAKEGVEIQEENKTMANITYQNLFRMYNKLAGMTGTAKTEQEEFREIYNMETITIPTNRPVQR KDEPDLLYPTLQSKFAAVVDRIKKLHAKGQPILVGTVAVETSEYLSQLLDKENIPHVVLNAKNHAKEAEIVKNAGQKGAV TIATNMAGRGTDIKLGPGVREIGGLAVIGTERHESRRIDNQLRGRSGRQGDPGLSQFYLSLEDDLMKRFGGDRIKAFLER MKVNDEDAVIKSRFLTHQVESAQKRVEGNNYDSRKNVLQYDDVMREQREIIYKERQQIITEDKSLKWVLMPMFRRTIQRE VDQHTLGDKKDWDLQGIVDFAEEVLIKPDTITVKDLEGKSPQEMVDYLMTFAQGVYKEKQKQLYDPAQMLEFEKVVILRV VDSHWTDHIDIMDQFRQSVGLRGYGQLNPLVEYQTAGYHMFEQMIADIEYETTRLFMKSEIRQNVTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 1e-151 | 43 |
