Gene Information

Name : Lreu_1857 (Lreu_1857)
Accession : YP_001272432.1
Strain : Lactobacillus reuteri DSM 20016
Genome accession: NC_009513
Putative virulence/resistance : Resistance
Product : ABC transporter-like protien
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1915079 - 1915768 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGTCAAAATTGAAGTTAGTAGATGTTAACAAATATTATGGCGAAGGAATTAGCCGTGTTCATGTTCTTAAAGATGTTAA
TTTTTCTGCTAAAGCGGGAGAATTAAATTTGATTTTAGGGCCTTCTGGATCAGGAAAGAGTACCTTTTTAACAATTGCGG
GCGGTTTACAAACGCCTACTTCCGGAAAAGTGTTAATTGATGGAATTAATATTGAAAAGTTATCTTCTAAAAAACGTGAT
GAACTGCGCTTGCAGAAAATTGGTTTTATTCTTCAGTCGTATAACTTGCTACCTTATCTAAATGTGGCTGATCAATTTAA
ACTTGTTGATCGTGTAAAGAAGAGCGGTAATATTTCATCAGCAGCTTTTGATGAATTATTGGAAAAACTCGCGATAAAAA
AACTGCTCAAGCAATACCCTTCTGAATTGTCAGGAGGTCAAAACCAACGAGTAGCGATTGCGCGTGCTTTATATACCGAT
CCTGAGATAATTCTTGCAGACGAACCAACAGCAGCTTTAGATAGTAATTTAGTAAAGTCAGTGGGACAATTATTTCAAGA
TCTGGCTAAAAAGAAAGGAAAAGCGGTGATTGCTGTAACCCATGATTTACGTTTACGTGAATATGCAGATAATGTTTACG
AGTTAGCCGATGGGAAACTTACATTAAGCAAAAATTCCACAGACCAATAA

Protein sequence : 
MSKLKLVDVNKYYGEGISRVHVLKDVNFSAKAGELNLILGPSGSGKSTFLTIAGGLQTPTSGKVLIDGINIEKLSSKKRD
ELRLQKIGFILQSYNLLPYLNVADQFKLVDRVKKSGNISSAAFDELLEKLAIKKLLKQYPSELSGGQNQRVAIARALYTD
PEIILADEPTAALDSNLVKSVGQLFQDLAKKKGKAVIAVTHDLRLREYADNVYELADGKLTLSKNSTDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-38 46
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lreu_1857 YP_001272432.1 ABC transporter-like protien CP001581.1.gene798.p Protein 9e-28 42
Lreu_1857 YP_001272432.1 ABC transporter-like protien CP001581.1.gene598.p Protein 2e-26 41
Lreu_1857 YP_001272432.1 ABC transporter-like protien NC_012469.1.7686878. Protein 6e-26 41