Gene Information

Name : lspA (Pput_0645)
Accession : YP_001265997.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : -
Position : 732142 - 732657 bp
Length : 516 bp
Strand : +
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGCCTAACCCTGCAGCGGGGCGCTTCGGGCGCCTTGCATGGCTTTGGCTGAGCTTGCTGGTCCTGGTCATCGACCAGGC
CACCAAGCTGTACTTCAACAACGCCCTGACCATGTACCAGCAGATCGTGGTCATTCCTGACTACTTCAGCTGGACCCTGG
CTTACAACACCGGTGCCGCGTTCAGCTTCCTGGCTGATGGTGCAGGTTGGCAGCGCTGGTTGTTCGCCCTGATCGCCGTG
GTGGTCAGCGCGGTGCTGGTGGTGTGGCTCAAACGCCTGGGGCGCAACGAGACCTGGCTGGCCGTGGCGCTGGCGCTGGT
GCTGGGTGGGGCGATTGGCAACCTGTACGACCGCATCGTGCTGGGCCATGTGGTCGACTTCATCCTGGTGCACTGGCAGA
ACCGTCATTACTTCCCGGCCTTCAACGTGGCCGACAGCGCCATCACCGTTGGTGCGGTGATGCTGGCGCTGGATATGTTC
AAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGA

Protein sequence :
MPNPAAGRFGRLAWLWLSLLVLVIDQATKLYFNNALTMYQQIVVIPDYFSWTLAYNTGAAFSFLADGAGWQRWLFALIAV
VVSAVLVVWLKRLGRNETWLAVALALVLGGAIGNLYDRIVLGHVVDFILVHWQNRHYFPAFNVADSAITVGAVMLALDMF
KSKKSEDPVHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 3e-05 43
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 5e-05 43
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 5e-05 43
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 3e-05 43
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 3e-05 43