Gene Information

Name : Pput_0584 (Pput_0584)
Accession : YP_001265936.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 650709 - 652229 bp
Length : 1521 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase

DNA sequence :
ATGCGTTATGCACATCCCGGTACCGAAGGCGCGAAGGTTTCCTTCAAGAGCCGCTACGGCAACTACATCGGTGGTGAGTT
CGTTACTCCGGTAAAGGGGCCGTACTTCGATAATACCTCCCCGGTGAATGGCAAGCTGATCGCTGAATTCCCCCGCTCTA
CTGCCGAAGACATCGAGAAGGCCCTGGATGCCGCCCATGCTGCGGCCGACGCCTGGGGCCGCACTTCAGTGCAGGATCGC
TCCAACGTGCTGCTGAAGATCGCCGACCGTATCGAGCAGAACCTCGAATTGCTGGCCATCACCGAAACCTGGGACAACGG
TAAGCCGATCCGCGAAACCCTCAACGCCGACATTCCGCTGGCGGTCGACCACTTCCGCTATTTCGCTGGCTGCATCCGCG
CCCAGGAAGGCGGCGCTGCCGAAATCAATGAAGGCACCGTGGCCTACCACATCCACGAGCCACTGGGCGTGGTCGGGCAG
ATCATCCCCTGGAACTTCCCGATCCTGATGGCTGCCTGGAAGCTTGCCCCGGCACTGGCCGCTGGTAACTGCGTGGTGCT
CAAGCCTGCCGAACAGACGCCGCTGGGCATCACCGTGCTGCTCGAAGTCATTGGCGACCTGCTGCCACCTGGCGTGCTCA
ACGTCGTGCAAGGCTATGGCCGCGAAGCCGGTGAAGCCCTGGCCACCAGCAAACGCATCGCCAAGATCGCCTTCACCGGC
TCTACCCCGGTCGGCTCGCACATCATGAAATGCGCCGCCGAGAACATCATCCCGTCAACCGTCGAACTGGGTGGCAAGTC
GCCGAACGTGTACTTCGAAGACATCATGCAGGCCGAGCCAAGCTTCATCGAGAAGGCGGCAGAAGGCATGGTGCTGGCGT
TCTTCAACCAGGGCGAAGTGTGCACCTGCCCGTCGCGAGCCCTGGTGCAAGAGTCGATCTATCCGCAGTTCATGGAAGTG
GTGATGAAGAAGGTGCTGCAGATCAAGCGCGGCGACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCCTCGCAGCA
GCAGTTCGAAAAGATCCTCTCGTACCTGCAGATCGCCCAGGACGAAGGCGCCGAGTTGCTCACCGGCGGCAAGGTCGAGA
AGCTGGAAGGTTCGCTGGCTACCGGTTACTACATCCAGCCGACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTCAGCGTCACCACCTTCAAAGACGAAGCCGAAGCACTGGCGATTGCCAACGACACCGA
GTTCGGCCTGGGCGCCGGCGTGTGGACCCGCGACATCAACCGTGCCTACCGCATGGGCCGCGGCATCAAGGCTGGCCGTG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCCGCGTTCGGCGGTTACAAGAAGTCGGGGGTTGGGCGTGAGACG
CACAAGATGATGCTGGATCACTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGCTGGGCTTCTTCTA
G

Protein sequence :
MRYAHPGTEGAKVSFKSRYGNYIGGEFVTPVKGPYFDNTSPVNGKLIAEFPRSTAEDIEKALDAAHAAADAWGRTSVQDR
SNVLLKIADRIEQNLELLAITETWDNGKPIRETLNADIPLAVDHFRYFAGCIRAQEGGAAEINEGTVAYHIHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLLEVIGDLLPPGVLNVVQGYGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNVYFEDIMQAEPSFIEKAAEGMVLAFFNQGEVCTCPSRALVQESIYPQFMEV
VMKKVLQIKRGDPLDTDTMVGAQASQQQFEKILSYLQIAQDEGAELLTGGKVEKLEGSLATGYYIQPTLLKGNNKMRVFQ
EEIFGPVVSVTTFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-159 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-159 66
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-152 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-159 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-158 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_0584 YP_001265936.1 aldehyde dehydrogenase VFG0082 Protein 3e-152 66