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Name : Pput_0549 (Pput_0549) Accession : YP_001265901.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 615688 - 616818 bp Length : 1131 bp Strand : + Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein DNA sequence : ATGCCCAGCCAAGCTGCCATTCTCGACGCCCACTACATGGCCCGCGCGCTGGAGCTGGCGCGTAAAGGCCTGTACACCAC CCACCCGAACCCGCGCGTAGGCTGCGTGATCGTGCGCGATGGCGAAGTGGTCGGTGAAGGCTGGCACGTGCGCGCCGGCG AGCCCCATGCCGAAGTGCATGCCCTGCGTCAGGCCGGTGAACTTGCCCGCGGTGCTTGTGCCTACGTCACCCTGGAACCA TGCAGCCATCATGGCCGTACGCCACCGTGTGCCGAGGCACTGGTCAAGGCCGGCGTGGCCCGTGTCGTAGCCGCCATGCA GGACCCTAACCCACAAGTGGCGGGGCAGGGCCTGCGGCGCCTGGCCGAAGCTGGAATCGAAGTGGCCAGCGGGGTGCTCG AAGCCGAGGCCCGCGCCCTCAACCCAGGCTTCCTCAAGCGTATGGAGCACGGCCTGCCGTTCGTTCGCGCCAAACTGGCC ATGAGCCTGGATGGCCGCACTGCCATGGCCAGTGGTGAAAGCCAGTGGATCACCGGCCCGGCCGCGCGCTCAGCCGTTCA GCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCGTGCGTG GCGCCGAGCTGGGCCTGGATGCCGAAACAGCCGCCCTGGCACTCAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGC CTGCGCCTGCCACTGGCGGCGCCGTTCTTCCAGGCGGGCCCAACGCTGGTGGTGACTGCTGTCGCAGATGACCCGCGCTA TGCCGCTGCCGGCCACGAATTGCTCAGCTTGCCGGGCGACAATGGCCAGGTCGACCTGGGGGCGCTGCTTCATGCCCTGG CCGCCCGCGGCGTCAACGAAGTCCTGCTGGAAGCCGGTGCCGGCCTGGTCGGTGCCTTTGCACGGCAAGGCCTGGTCGAC GAGTACCAGCTGTTCGTCGCTGGCACCTTCCTCGGCTCTCAGGCCCGGCCGCTGCTGGACTGGCCGATGGACAAGATGAG CGAAGCACCACGGCTGAAAATTACCGAAATGCGAGCAGTGGGCGATGACTGGCGGGTCACGGCCATCCCTCTGCCAGCGC CCGGCGTATAA Protein sequence : MPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGELARGACAYVTLEP CSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLA MSLDGRTAMASGESQWITGPAARSAVQRLRARSSVVLTSAASVLADNARMTVRGAELGLDAETAALALSRTPLRVLVDGR LRLPLAAPFFQAGPTLVVTAVADDPRYAAAGHELLSLPGDNGQVDLGALLHALAARGVNEVLLEAGAGLVGAFARQGLVD EYQLFVAGTFLGSQARPLLDWPMDKMSEAPRLKITEMRAVGDDWRVTAIPLPAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-59 | 49 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-59 | 49 |
