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Name : rph (Pput_5202) Accession : YP_001270504.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 5844881 - 5845603 bp Length : 723 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAAACGTCCAAGTGGTCGCGTTGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAGCACGCCGAAGG GTCGGTACTGGTCGAGTTCGGTGACACCAAAGTCATCTGCACGGTCAGCGTTGAAAACGGTGTACCGCGCTTCCTCAAAG GCCAGGGCCAAGGCTGGCTGACCGCCGAGTATGGCATGCTGCCGCGCTCCACCGGCGAACGTAACCAGCGTGAGGCCAGC CGTGGCAAGCAGGGTGGCCGCACCCTGGAAATCCAGCGCCTGATCGGCCGTTCGCTGCGCGCCGCGCTGGACATGAGCAA GCTCGGTGACATCACCCTGTACGTCGATTGCGACGTGATCCAGGCCGATGGCGGTACCCGTACCGCGTCCATCACCGGCG CCATGGTTGCCTTGTGCGACGCTTTGGCAGTGATCAAGAAGCGCGGCGGCCTCAAGGGCGGCAACCCGCTCAAGCACATG ATCGCTGCCGTGTCGGTAGGCATGTACCAGGGCGAAGCCGTGCTTGATCTGGACTACCTGGAAGACTCCGCAGCCGAAAC CGACCTGAATGTGGTCATGACCAGCGCTGGTGGCTTCATCGAAGTGCAGGGTACTGCCGAAGGCGCACCGTTCCAGCCGG AAGATTTCAACGCCATGCTCGCTCTGGCGCAGAAGGGCATGAACGAGATTTTCGAGCTGCAGCAGGCAGCACTGGCTGAC TGA Protein sequence : MKRPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREAS RGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHM IAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMNEIFELQQAALAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 8e-64 | 59 |
