Gene Information

Name : Pput_5072 (Pput_5072)
Accession : YP_001270374.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Unknown
Product : NLPA lipoprotein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 5699634 - 5700569 bp
Length : 936 bp
Strand : -
Note : PFAM: NLPA lipoprotein

DNA sequence :
ATGGTATTGTGTTTTTGGAATAAGCAGCTAAGTAAAAGATATTGTTGCGGAATAAAAAATTTGGGTATCGTCCGCCTCAC
GCCCACTGGTGAACCGGTTGGGCACCCGATTTGCCATCGTCGATGGCCCAGATTCAGAACAAGGACCACCATGAAGAAGA
CCCTGCTGACCACTGCCCTGGCTGCTGCCCTGTCGTTTTCCGGCCTGGCCGCTGCTGCCGAGAAACTGGTGGTTGCCGCT
ACCCCGGTACCGCACGCCGAAATTCTCGAACTGATCAAGCCGACCCTGGCAAAAGAAGGCGTGGACCTTCAGATCAAGGT
CTTCACCGATTACGTACAGCCGAACGTGCAGGTGGACCAGAAGCGTCTGGATGCCAACTACTTCCAGACCCTGCCGTACT
TGAAGAGCTTCAACGAAGGCAAGGGCACCCACCTGGAAACCGTGATCGGTGTGCACGTCGAGCCGTTCGGTGGTTACTCG
AAGAAGATCAAGAACCTGTCCGAGCTGAAGGAGGGCGCCACCGTTGCCATCCCTAACGAAGGCAGCAACAGCGGCCGCGC
CCTGATCCTGCTGCAGAAGGCTGGCCTGATCACTCTGAAAGACCCGAAAAACGCCCTGGCCACGCCAAAGGACATTGCCG
AGAACCCGAAGAAGCTGAAGTTCCGCGAGCTTGAATCGGCCATGCTGCCGCGTGTGCTGGACCAGGTCGACCTGGACATG
ATCAACACCAACTACGCCCTGGAAGCCGGCCTGAACCCGGCCAAGGACGCGCTGGTGATCGAAGGTGCCGACTCGCCGTA
CGTGAACTTCCTGGTTGCCCGCCCGGACAACAAGGACAGCGAAGCCATCCAGAAACTGGCCAAGGCCCTGACCAGCCCTG
AAGTGAAGGAATTCATTGCCAAGAAGTACCAGGGTGCGGTGCTGCCGGCGTTCTGA

Protein sequence :
MVLCFWNKQLSKRYCCGIKNLGIVRLTPTGEPVGHPICHRRWPRFRTRTTMKKTLLTTALAAALSFSGLAAAAEKLVVAA
TPVPHAEILELIKPTLAKEGVDLQIKVFTDYVQPNVQVDQKRLDANYFQTLPYLKSFNEGKGTHLETVIGVHVEPFGGYS
KKIKNLSELKEGATVAIPNEGSNSGRALILLQKAGLITLKDPKNALATPKDIAENPKKLKFRELESAMLPRVLDQVDLDM
INTNYALEAGLNPAKDALVIEGADSPYVNFLVARPDNKDSEAIQKLAKALTSPEVKEFIAKKYQGAVLPAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 2e-35 44