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Name : Pput_5030 (Pput_5030) Accession : YP_001270334.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 5657225 - 5658505 bp Length : 1281 bp Strand : - Note : PFAM: UMUC domain protein DNA-repair protein DNA sequence : ATGCCAAGCTCTGATCGTGTCTTCGCTCTCATCGACTGCAACAGCTTTTACGCCAGCTGCGAGCGGGTGTTCCGGCTCGA CTTGCGGCACAAGCCCGTCGTTGTCCTGAGCAACAACGACGGCTGCGTGATAGCCCGCTCGGCAGATGCCAAGCCGTGGA TCAAGATGGGTGAGCCCTACTTCCAGATCAAGGACAAGCTCCGCAAGCACGGTATCGTGGCGTGCTCGTCCAATTACCAG CTTTACGGTGACATGTCCGAACGCGTCATGACCGTCATCGAGTCCATGGTGCCGGCGTCCGAGGTCTACAGCATCGACGA AGCATTCGCCGACCTGACTGGCATGCCGGGAGATCTTGAGCTGCTTGGCAGGAAGATCCGAGCGGAGGTGTATCGTCGTA CCGGCATACCGGTGGGTGTTGGCATCGCATTAACAAAGACCTTGGCCAAGCTGGCTAACCATGCGGCGAAACAATGGCAG AGCTACACGGGTGGCGTCGTCGATCTTCGTGACAAGATCAAGCGCGACTGGGTGCTCAAAAAGTGCGATGCGTCTGACGT CTGGGGTATTGGACGACGTATGTCGGCGCACCTGGAGGCGATGGGCATCCGTACCGCCTGGGAGTTGGCCCATGCAGACG CTTGGACGCTGAGGAAGAAATTCAGTGTCGTGGTCGAAAAGACAGCCCGAGAACTCGCAGGCACCACTTGCTTGGATTTG GACGAGCCGAACCCGCCAAAGCAGGAAATTTGCTGCAGCAGGATGTTCGGCCAGCGCCTGACCGACCTCGCTCCCATCAA GGAAGCTGTTTCAACCTACGCCTCACGTGCCGCTGAGAAACTGCGGGCCCAGGAGTCGTTGTGCAAGCGCATTCGAGTCA GCATCCGCACAGGAATGTTCAACCCTGACGAGGCCAAGTACGCGAATGGTGTGATTGTTGAGCTGCCGTATCCCACCGAT GACACTCGTCTGCTCACCAAGGCTGCCCAGGAGGGCGTAGAGCGCGTTTACCGTGAAGGCTTTCGATACAGCAAGGCAGA AGTGCTGCTGCTAGACCTGAGCAAGCGTGGGGAAATTACGGGTGATCTGTTCGCAGCAGCTCAACCGGTGGCCAGTGAAA AACTCATGGGGGTGCTGGACACCGTGAACGCCCGCTGGGGACGTGGCACCATGCGCCTGGCCAGTGTGCCGGTCGACCCT TTCTGGGGCATGCGGCGCGAGATGATGAGCCAAAGCTACACCACAAAAATGGACGAGCTCTGGACTGTGTATTGCAAGTG A Protein sequence : MPSSDRVFALIDCNSFYASCERVFRLDLRHKPVVVLSNNDGCVIARSADAKPWIKMGEPYFQIKDKLRKHGIVACSSNYQ LYGDMSERVMTVIESMVPASEVYSIDEAFADLTGMPGDLELLGRKIRAEVYRRTGIPVGVGIALTKTLAKLANHAAKQWQ SYTGGVVDLRDKIKRDWVLKKCDASDVWGIGRRMSAHLEAMGIRTAWELAHADAWTLRKKFSVVVEKTARELAGTTCLDL DEPNPPKQEICCSRMFGQRLTDLAPIKEAVSTYASRAAEKLRAQESLCKRIRVSIRTGMFNPDEAKYANGVIVELPYPTD DTRLLTKAAQEGVERVYREGFRYSKAEVLLLDLSKRGEITGDLFAAAQPVASEKLMGVLDTVNARWGRGTMRLASVPVDP FWGMRREMMSQSYTTKMDELWTVYCK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-150 | 72 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-122 | 69 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-81 | 47 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-81 | 47 |
