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Name : Pput_4798 (Pput_4798) Accession : YP_001270102.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 5374205 - 5376085 bp Length : 1881 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGACCAAACAAGAAAAAGCGATCAACCTCAGCGAATCGGCACAAGTCGATCAGCAGTCCGTGCAACCGTTCCCGCGTTC GCGCAAGGTGTATGTCGAAGGCTCGCGCCCGGACATCCGTGTCCCCATGCGTGAAATCAGCCTGGATGACACCCCGACCG ATTTCGGCGGCGAGTCCAACGCCCCGGTGCTGGTGTATGACACGTCTGGCCCGTACACCGACCCCGACGTGATCATCGAC GTGCGCAAAGGCCTGGCCGATGTGCGTTCGGCGTGGATCGAAGCCCGCGGTGACACCGAGCGCCTGGAAGGCCTGAGCTC CGACTTCGGTCAGCAGCGCCTGAACGATGCGGAGCTGGCCAAGCTGCGTTTCGCCCATGTGCGCAACCCGCGCCGGGCCA AGGCCGGCGCCAACGTCTCGCAGATGCACTATGCCCGTCAGGGCATCATCACCGCCGAAATGGAATACGTGGCCATCCGC GAGAACATGAAGCTACAGGAGGCCCGCGCCGCCGGCCTGCTGAATGAGCAACATGCCGGCCACAGCTTCGGTGCCAACAT CCCGAAAGAAATTACCCCTGAATTCGTCCGCCAGGAAATCGCCCGTGGCCGCGCGATCATTCCGGCCAACATCAACCACC CGGAAGTAGAGCCGATGATCATCGGCCGCAATTTCCTGGTGAAGATCAACGGCAACATCGGCAACAGCGCCCTGGGTTCC TCGATCGAGGAAGAGGTGGCCAAGCTGACCTGGGGCATCCGCTGGGGCTCGGACACGGTCATGGACTTGTCCACCGGCAA GCACATCCACGAAACCCGCGAGTGGATCATTCGCAACTCGCCGGTGCCGATCGGTACCGTGCCGATCTACCAGGCCCTGG AAAAGGTCAACGGCGTGGCAGAGGACCTGACCTGGGAACTGTTCCGCGACACCCTGATCGAGCAGGCCGAACAGGGTGTG GACTACTTCACCATTCACGCCGGTGTGCTGCTGCGCTATGTGCCCCTGACCGCCAAGCGGGTCACCGGCATCGTCAGCCG CGGTGGCTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAGGAAAACTTCCTGTACACCCACTTCGACGAAATCTGCG AAATCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGCGACGGCCTGCGCCCTGGCTCGATTGCCGACGCCAACGACGCC GCGCAATTCGGTGAGCTGGAAACCCTCGGCGAGCTGACCAAGATTGCCTGGAAGCACGACGTGCAATGCATGATCGAAGG CCCCGGCCACGTGCCGATGCAGTTGATCAAAGAGAACATGGACAAGCAGCTGGAGTGCTGCGACGAGGCGCCGTTCTACA CCCTCGGCCCACTGACCACCGACATCGCGCCGGGTTACGACCACATCACCTCGGGCATTGGTGCGGCGATGATCGGCTGG TTCGGTTGCGCCATGCTCTGCTACGTCACGCCGAAGGAGCACTTGGGCCTGCCGAACAAGGACGACGTCAAGACCGGCAT CATCACCTACAAGATCGCCGCGCATGCCGCCGACCTTGCCAAGGGCCACCCGGGTGCACAGATTCGCGACAACGCCTTGT CCAAGGCGCGTTTCGAGTTCCGTTGGGAAGACCAGTTCAACCTGGGCCTCGACCCGGACACTGCCCGCGCTTTCCACGAC GAGACCCTGCCGAAGGAATCGGCCAAGGTCGCGCACTTCTGCTCGATGTGCGGGCCGAAGTTCTGCTCGATGAAGATCAC CCAGGAAGTGCGTGAGTACGCAGCCAAGATCGAGGCCGTGGATGTGACGGTCGAGCAAGGCATGCGTGAGCAGGCCGAGC GGTTCCGCCAGGAAGGCAGCCAGCTGTACCACAAAGTCTAA Protein sequence : MTKQEKAINLSESAQVDQQSVQPFPRSRKVYVEGSRPDIRVPMREISLDDTPTDFGGESNAPVLVYDTSGPYTDPDVIID VRKGLADVRSAWIEARGDTERLEGLSSDFGQQRLNDAELAKLRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIR ENMKLQEARAAGLLNEQHAGHSFGANIPKEITPEFVRQEIARGRAIIPANINHPEVEPMIIGRNFLVKINGNIGNSALGS SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWELFRDTLIEQAEQGV DYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDA AQFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHD ETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAAKIEAVDVTVEQGMREQAERFRQEGSQLYHKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 78 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 78 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
