Gene Information

Name : Pput_4754 (Pput_4754)
Accession : YP_001270058.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 5324056 - 5325453 bp
Length : 1398 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGAACGAGATCACCACCTCCGAACAGCTTGACCTGCAAACCGCAGCCCTGAAGGTACCGCCGCATTCCATCGAGGCCGA
ACAGGCCGTGCTCGGTGGCCTGATGCTGGACAACAATGCCTGGGAGCGGGTGCTGGACCAGGTGTCGGACGGCGATTTCT
ACCGGCATGACCACCGGCTGATCTTCCGCGCTGTGCACAAGTTGGCCGACGCCAACCAGCCATTCGACGTGGTGACCCTG
CACGAGCAGTTGGACAAGGAAGGCCTGTCCTCGCAGATCGGCGGTTTGGCTTACCTGGCCGAGCTGGCCAAGAACACCCC
TTCGGTGGCCAACATCAAGGCCTACGCCGCGATCATTCGCGAGCGGGCCACGTTGCGCCAGCTGATCAGCATCAGTACCG
ACATCGCCGACAACGCGTTCAACCCGCAGGGGCGCAACGCTGCCGAGATTCTCGACGATGCCGAACGGCAGATCTTCCAG
ATCGCCGAGGCGCGGCCTAAAACCGGCGGCCCGGTGGGCGTCAACGAGCTGTTGACCATGGCCATCGACCGCATCGATAC
GCTGTTCAACTCCGACAGTGACATCACCGGTATCTCCACCGGGTACACCGACCTGGACGAGAAGACCAGCGGCCTGCAGG
CGGCAGACTTGATCATCGTCGCCGGCCGTCCGTCGATGGGTAAGACCACCTTCGCCATGAACCTGGTGGAAAACGCCGTA
CTGCGGACCGACAAGGCGGTGCTGGTGTTCTCCCTCGAGATGCCAGGTGAGTCGCTGATCATGCGTATGCTCTCGTCTCT
GGGTCGTATCGACCAGACCAAGGTCCGTTCCGGCCAGCTGGATGACGACGACTGGCCGCGCCTGACCTCGGCAGTGAACC
TGCTCAACGACCGAAAATTGTTCATCGACGATACAGCGGGTATCAGCCCCTCGGAAATGCGCGCGCGTACCCGCCGCCTG
GCCCGTGAGCATGGCGAGATCGCCATGATCATGGTCGACTACCTGCAGCTGATGCAGATTCCGGGGTCGGCCGGTGACAA
CCGTACCAACGAAATTTCCGAGATTTCCCGCTCGCTCAAGGCCCTGGCCAAGGAATTCAACTGCCCGGTCATTGCCCTTT
CGCAGCTGAACCGCTCGCTGGAACAGCGCCCGAACAAACGCCCGGTGAACTCCGACTTGCGTGAATCCGGTGCAATCGAG
CAGGACGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTACCACCCCGAGACCGAGCACAAGGGCGTGGCGGAAAT
CATCATCGGCAAACAGCGTAACGGCCCCATCGGCTTCGTGCGTTTGGCGTTTATCGGCAAGTACACCCGGTTCGAGAACT
TGGCGCCGGGGATGTACAACTTTGATGATGATGAATAA

Protein sequence :
MNEITTSEQLDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAVHKLADANQPFDVVTL
HEQLDKEGLSSQIGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLISISTDIADNAFNPQGRNAAEILDDAERQIFQ
IAEARPKTGGPVGVNELLTMAIDRIDTLFNSDSDITGISTGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAV
LRTDKAVLVFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTRRL
AREHGEIAMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIE
QDADVIMFVYRDEVYHPETEHKGVAEIIIGKQRNGPIGFVRLAFIGKYTRFENLAPGMYNFDDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 8e-119 58
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-106 56
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 8e-104 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-104 52
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 9e-104 51
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-98 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-96 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-96 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-78 42