Gene Information

Name : Pput_4623 (Pput_4623)
Accession : YP_001269927.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : transcriptional regulator-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 5184132 - 5185007 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACGCAAGCAATCCATCGAGCAGGTACGCTGGGACCTGGCACTTCGCTATCGCTTGATCGAGACCGTTGCCTGGTG
GGAAGGCCGGCTGACCACGGGGCACCTGATGCAGAGCTTTGGCATCAGCCGTCAGCAGGCGTCGAAGGACATCAACACCT
ACATCACCGAACATGCGCCCGAAAACTTGACGTATGACAAGCAGATCAAGGGCTATGTACCGAGCGAGCAGTTCGAGCCA
CGGTTCATCGACAACAGCGCAAGCGCCTATCTGCACCTGCTGTACCAGAACAATGAGCGCGCCCCGCACATCGACGGGCT
GGCACTGGCCTATGCACACACCCGGGTGCTGGAAGTACCCGATCGCCCAATCCGGCCAGAGGTGCTGCGCCCCTTGCTCA
AAGCCTGCCGTGAAGGCCTGCGCCTGGAAACCGAATACGTGTCCTTCAACACCCCCAACGTCGAGGTACGCCTGATCGCC
CCGCACACGCTGGTGTACACCGGCATGCGCTGGCACGTGCGGGCTTATTGCGAAAAGAACAGCCAGTACCGCGACTTCGT
GCTGAGCCGCTTGCGCGGGCAGCCGGACTTGCTCGACGCATCGCCGAACACGCGTGAGCAGGATGAAGACTGGAATGTGG
AAGTGCCCGTCATCTTCGAACCTGATGGGCGGTTGAACGCGGCGCAGAAGGCAATCATCGAAACCGACTTCGGCATGACG
GATGGGCAATTGGTGGTACCCAGCCGCAGGGCGTTGGTGAAGTATGTGTTGCAGCGGTATCAGATCGACCACCGCAACAT
GGCGATACTGCCCGAGGCCCAGCAACTGGTGGTGAGCAACCTCCAGGAACTGCAGCCGTGGTTGATGAAGTACTGA

Protein sequence : 
MKRKQSIEQVRWDLALRYRLIETVAWWEGRLTTGHLMQSFGISRQQASKDINTYITEHAPENLTYDKQIKGYVPSEQFEP
RFIDNSASAYLHLLYQNNERAPHIDGLALAYAHTRVLEVPDRPIRPEVLRPLLKACREGLRLETEYVSFNTPNVEVRLIA
PHTLVYTGMRWHVRAYCEKNSQYRDFVLSRLRGQPDLLDASPNTREQDEDWNVEVPVIFEPDGRLNAAQKAIIETDFGMT
DGQLVVPSRRALVKYVLQRYQIDHRNMAILPEAQQLVVSNLQELQPWLMKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 2e-67 48
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 2e-67 48
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 2e-66 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_4623 YP_001269927.1 transcriptional regulator-like protein VFG1105 Protein 9e-68 48