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Name : Pput_4152 (Pput_4152) Accession : YP_001269460.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 4647450 - 4650023 bp Length : 2574 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGTCCAGTCTTTCCGACCACACACCAATGATGCAGCAGTACTGGAAGCTGAAAAACCAGCACCCGGACCAGCTGATGTT CTACCGCATGGGCGACTTCTACGAGATCTTCTACGAAGATGCGAAAAAGGCCGCGAAACTGCTGGATATCACCCTGACCG CCCGCGGTCAGTCGGCCGGCCAGTCCATCCCCATGTGCGGGATTCCGTTCCATTCGCTGGAAGGCTACCTGGCCAAGCTG GTCAAGCTTGGCGAGTCGGTGGTGATCTGTGAGCAGATCGGCGACCCCGCCACCAGCAAGGGCCCGGTGGAGCGCCAGGT GGTGCGCATCATCACCCCCGGCACAGTCAGTGACGAGGCACTGCTCGACGAGCGCCGCGACAACCTGATTGCCGCACTGC TCGGTGACGAGCGCCTGTTCGGCCTGGCGGTACTGGACATCACCAGCGGCAATTTCAGCGTGCAGGAGATCAAGGGCTGG GAAAACCTGCTGGCCGAACTCGAGCGCCTGAACCCGGTCGAGCTGTTGATCCCCGACGACTGGCCACGGGACCTGCCTGC GGAGAAACGCCCAGGCGCCCGCCGCCGCGCACCCTGGGACTTCGACCGCGACTCGGCACGCAAGGCCCTGTGCCAGCAGT TCGCGACCAAGGACCTCAAGGGCTTCGGCTGCGACAAGCTGACCCTGGCCATCGGCGCCGCCGGCTGCCTGCTGACCTAT GCCAAGGAAACCCAGCGCACCGCCCTGCCGCACCTGCGCAGCCTGCGCCACGAGCGTCTGGACGATACAGTCATCCTCGA TGGGGCCAGCCGCCGCAACCTGGAGCTGGACATCAACCTGGCCGGTGGGCGCGACAACACCCTGCAATCGGTGATCGACC GCTGCCAGACCGCCATGGCCAGCCGCCTGCTGAGCCGCTGGCTGAACCGCCCGCTGCGCGACCTCAAGGTGCTGCAAGCA CGCCAGGACTCGATCCGCTGCCTGCTCGACAGCTACCGCTTCGAAAAGCTGCAGCCGCAGTTGAAGGAAATTGGCGATAT CGAGCGGATCCTCGCCCGTATTGGCCTGCGCAATGCCCGCCCGCGCGACCTGGCACGCCTGCGCGATGCGCTGGGCGCGC TGCCAGAACTGCAGAACGCCATGACCGAGCTCGAAGCGCCGCACCTGGCGCGTCTGGCGGCCATTACCGGTACCTATCCG GAGCTGGCCAGCCTGCTGGAGCGGGCGATCATCGATAACCCGCCGGCGGTGATCCGCGACGGCGGTGTACTGAAAGCCGG CTATGACAACGAACTGGACGAGCTGCTGGCAATCAGCGAGAACGCCGGTCAGTTCCTGATCGACCTGGAAGCCCGGGAAA AGGCCCGCACCGGCCTTGCCAACCTCAAGGTCGGCTACAACCGCGTGCACGGCTACTTCATCGAACTGCCGACCAAGCAG GCCGAGCAGGCCCCGGGCGACTACATCCGCCGCCAGACCCTCAAAGGCGCCGAGCGCTTCATCACCCCGGAGCTGAAGGC GTTCGAGGACAAGGCATTGTCGGCCAAGAGCCGCGCCCTGGCCCGCGAGAAGATGCTCTACGACGCGCTGCTGGAAACCC TGATCAGCCACCTGGCACCGCTGCAGGACAGCGCCGCCGCCCTGGCCGAACTGGATGTGCTCAGCAACTTGGCCGAGCGC GCACTGAACCTCGACCTGAGCTGCCCACGCTTTGTCGACGAGCCTTGCCTGCGCATCGAGCAGGGCCGCCACCCGGTGGT GGAACAGGTACTGACCACGCCGTTCGTGGCCAACGACCTGGGCCTGGACAACAGTACGCGCATGCTGATCATCACCGGCC CCAACATGGGCGGTAAGTCGACCTACATGCGCCAGACTGCGCTTATCGTGCTCCTGGCCCACATCGGTAGCTTCGTGCCG GCAGCCAGCTGCGAGCTGTCGCTGGTCGACCGCATCTTCACCCGCATCGGCTCCAGTGACGACCTGGCCGGCGGGCGCTC GACCTTCATGGTGGAGATGAGCGAAACCGCCAACATCCTGCACAACGCCACCGACCGCAGCCTGGTGCTGATGGACGAAG TGGGCCGCGGTACCAGCACCTTCGATGGCCTGTCGCTGGCCTGGGCTGCCGCCGAGCGCCTGGCCCAGCTGCGTGCCTAC ACACTGTTCGCCACCCACTACTTCGAACTGACCGTGCTGCCGGAGAGCGAGCCGCTGGTGGCCAACGTGCACCTGAACGC CACCGAGCACAATGAACGCATCGTGTTCCTGCACCACGTGCTACCCGGCCCTGCCAGCCAAAGCTACGGCCTGGCCGTTG CGCAGCTGGCCGGCGTACCGACGGCAGTGATCCAGCGTGCCCGCGAGCACCTTGGCCGGCTGGAAACCACCAGCCTGCCC CATGAGCAGCCTGCGGCCCACAAGGCCAAGGACGCGCCGCAAGTGCCGCACCAGAGCGACTTGTTTGCCAGCCTGCCTCA TCCAGCCATCGAGAAGCTGGGCAAGCTGCAACTGGACGACATGACCCCGCGTCAAGCTATCGAAATGCTATATCAACTAA AGAACCTGTTATAA Protein sequence : MSSLSDHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFHSLEGYLAKL VKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGW ENLLAELERLNPVELLIPDDWPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTY AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQTAMASRLLSRWLNRPLRDLKVLQA RQDSIRCLLDSYRFEKLQPQLKEIGDIERILARIGLRNARPRDLARLRDALGALPELQNAMTELEAPHLARLAAITGTYP ELASLLERAIIDNPPAVIRDGGVLKAGYDNELDELLAISENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIELPTKQ AEQAPGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLAER ALNLDLSCPRFVDEPCLRIEQGRHPVVEQVLTTPFVANDLGLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVP AASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAY TLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPTAVIQRAREHLGRLETTSLP HEQPAAHKAKDAPQVPHQSDLFASLPHPAIEKLGKLQLDDMTPRQAIEMLYQLKNLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pput_4152 | YP_001269460.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 59 |
