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Name : Pput_0415 (Pput_0415) Accession : YP_001265772.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 479578 - 480273 bp Length : 696 bp Strand : - Note : PFAM: Integrase, catalytic region DNA sequence : GTGTACGGCTACCGCAAAATTCATAATGACCTACGTGAGCTAGGAGAGACATGCGGGCGAAATCGAGTCGGTCGTTTGAT GCAGGCAGAGGGGTTGCGTTCGCAAACAGGTTATCGCCGTCGACCTGGGTTTTATGGCGGAAAACCAACCGCGGCCTCGC CCAACCACCTTGCCCGGCAGTTCAAGGTCAGCGAGCCGAACAAGGTCTGGGTGACAGATATCACTTACATTCGCACCTAT GAAGGATGGCTTTATCTGGCGGTAGTGCTGGATCTTTTCTCACGTCAGGTAATTGGTTGGTCAATGAAGCCAAGGATGTG CAGCGACCTTGCTATCGACGCGATGCTGATGGCCGTGTGGCGACGCAAGCCACAGCAACAAGTGATGATTCATTCAGACC AAGGCAGTCAATTCAGTAGCTCAGATTGGCAAAGCTTCTTGAAAGCCAACAACGTCATTAGCAGTATGAGTCGGCGAGGA AACTGCCACGACACTGCCGTAGCCGAGAGCTTTTTCCAGCTTTTGAAGCGGGAGCGAATCCGACGAAAGATCTACGCAAC GCGTGACGAAGCCCGCAGTGATATTTTCGATTACATCGAGATGTTCTATAACCCAAAACGTCGACACAGCAGCGCTATGC AGCTGTGTCCAGTAGAATATGAGAAACGCTATTTTCTGAGCTTGGAGAGTGTCTAG Protein sequence : MYGYRKIHNDLRELGETCGRNRVGRLMQAEGLRSQTGYRRRPGFYGGKPTAASPNHLARQFKVSEPNKVWVTDITYIRTY EGWLYLAVVLDLFSRQVIGWSMKPRMCSDLAIDAMLMAVWRRKPQQQVMIHSDQGSQFSSSDWQSFLKANNVISSMSRRG NCHDTAVAESFFQLLKRERIRRKIYATRDEARSDIFDYIEMFYNPKRRHSSAMQLCPVEYEKRYFLSLESV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 8e-40 | 46 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 4e-39 | 45 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 9e-40 | 45 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 6e-40 | 45 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 3e-31 | 44 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 3e-31 | 44 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 2e-39 | 44 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 2e-30 | 43 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 2e-30 | 43 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-29 | 43 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 2e-29 | 43 |
| tnpA | AAD44733.1 | TnpA | Not tested | SHI-2 | Protein | 2e-35 | 43 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 2e-29 | 42 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 1e-29 | 42 |
| ECO111_3779 | YP_003236114.1 | putative IS602 transposase OrfB | Not tested | LEE | Protein | 1e-30 | 42 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 9e-40 | 42 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 1e-35 | 42 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 1e-35 | 42 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 1e-35 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pput_0415 | YP_001265772.1 | integrase catalytic subunit | VFG1484 | Protein | 2e-31 | 44 |
| Pput_0415 | YP_001265772.1 | integrase catalytic subunit | VFG0785 | Protein | 9e-30 | 42 |
| Pput_0415 | YP_001265772.1 | integrase catalytic subunit | VFG1631 | Protein | 5e-40 | 42 |
